RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.23□□□□□ -0.93
COL4A5-204ENST00000477429 FAM214AQ32MH5 1076 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 ODF2Q5BJF6 829 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 ACER2Q5QJU3 275 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 ABHD17BQ5VST6 288 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 PRMT9Q6P2P2 845 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 LRRC8BQ6P9F7 803 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 DARS2Q6PI48 645 aaKnown RBP9.23□□□□□ -0.93
COL4A5-204ENST00000477429 RIPOR1Q6ZS17 1223 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.23□□□□□ -0.93
COL4A5-204ENST00000477429 CRLF3Q8IUI8 442 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 TMTC1Q8IUR5 882 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 PLD3Q8IV08 490 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 RHOT2Q8IXI1 618 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 RCOR2Q8IZ40 523 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 THAP3Q8WTV1 239 aaPredicted RBP9.23□□□□□ -0.93
COL4A5-204ENST00000477429 STYXQ8WUJ0 223 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 CHTF18Q8WVB6 975 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 ZUFSPQ96AP4 578 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 SDCCAG3Q96C92 435 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 SCMH1Q96GD3 660 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 MAGED4Q96JG8 741 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 CCDC138Q96M89 665 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 MACROD1Q9BQ69 325 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 DPH7Q9BTV6 452 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 ACAT2Q9BWD1 397 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 VN1R1Q9GZP7 353 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 IL1RAPL1Q9NZN1 696 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 MKL2Q9ULH7 1088 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 AAR2Q9Y312 384 aaKnown RBP9.23□□□□□ -0.93
COL4A5-204ENST00000477429 NBEAL2Q6ZNJ1 2754 aa9.23□□□□□ -0.93
COL4A5-204ENST00000477429 MACROD2A1Z1Q3 448 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 PJA2O43164 708 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 NEURL1O76050 574 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 OR56A5P0C7T3 313 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 FDXRP22570 491 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 DNAJA1P31689 397 aaKnown RBP9.22□□□□□ -0.93
COL4A5-204ENST00000477429 ALDH6A1Q02252 535 aaKnown RBP9.22□□□□□ -0.93
COL4A5-204ENST00000477429 RBPJQ06330 500 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 OR1C1Q15619 314 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 KCTD19Q17RG1 926 aaPredicted RBP9.22□□□□□ -0.93
COL4A5-204ENST00000477429 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.22□□□□□ -0.93
COL4A5-204ENST00000477429 H3F3CQ6NXT2 135 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 CAVIN1Q6NZI2 390 aaKnown RBP9.22□□□□□ -0.93
COL4A5-204ENST00000477429 SUSD1Q6UWL2 747 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 GALNTL5Q7Z4T8 443 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 PRUNE1Q86TP1 453 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 PAQR7Q86WK9 346 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 CDKL3Q8IVW4 592 aaPredicted RBP9.22□□□□□ -0.93
COL4A5-204ENST00000477429 OR52K1Q8NGK4 314 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 ALG3Q92685 438 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 SLC22A18Q96BI1 424 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 MMABQ96EY8 250 aaPredicted RBP9.22□□□□□ -0.93
COL4A5-204ENST00000477429 CABS1Q96KC9 395 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 OR2A5Q96R48 311 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 TGIF2Q9GZN2 237 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 RIC8BQ9NVN3 520 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 GALPQ9UBC7 116 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 SLC39A10Q9ULF5 831 aa9.22□□□□□ -0.93
COL4A5-204ENST00000477429 TCRBV7S2A1N4TA0A589 114 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 SOWAHDA6NJG2 315 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 ASNA1O43681 348 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 DNAJB6O75190 326 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 TOXO94900 526 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 UQCRHP07919 91 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 F7P08709 466 aaPredicted RBP9.21□□□□□ -0.94
COL4A5-204ENST00000477429 CD1EP15812 388 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 CXCR2P25025 360 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 RFC3P40938 356 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 GTF3C1Q12789 2109 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 PRPSAP1Q14558 356 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 MUM1Q2TAK8 710 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 BTBD16Q32M84 506 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 UNC5DQ6UXZ4 953 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 CEP128Q6ZU80 1094 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 KIF2BQ8N4N8 673 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 CPSF7Q8N684 471 aaKnown RBP9.21□□□□□ -0.94
COL4A5-204ENST00000477429 CSNK1A1LQ8N752 337 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 DNAAF3Q8N9W5 541 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 FAM71DQ8N9W8 422 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 OR8K1Q8NGG5 319 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 OR9A4Q8NGU2 314 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 HMGCLL1Q8TB92 370 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 CYTH2Q99418 400 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 SMR3AQ99954 134 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 ZFYVE21Q9BQ24 234 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 PLCD4Q9BRC7 762 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 DLL4Q9NR61 685 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 ABHD10Q9NUJ1 306 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 INTS7Q9NVH2 962 aaKnown RBP9.21□□□□□ -0.94
COL4A5-204ENST00000477429 TTC7AQ9ULT0 858 aaPredicted RBP9.21□□□□□ -0.94
COL4A5-204ENST00000477429 PPT2Q9UMR5 302 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 FAM169AQ9Y6X4 670 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 INTS1Q8N201 2190 aaKnown RBP9.21□□□□□ -0.94
COL4A5-204ENST00000477429 HCFC1P51610 2035 aa9.21□□□□□ -0.94
COL4A5-204ENST00000477429 MEGF8Q7Z7M0 2845 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 ABCA4P78363 2273 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 FAM90A27PA6NNH2 459 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 E9PLN8 166 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms