RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PAQR3Q6TCH7 311 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 IGFL2Q6UWQ7 119 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 Q6ZS92 163 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 KIAA0408Q6ZU52 694 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 SYDE1Q6ZW31 735 aaPredicted RBP10.28□□□□□ -0.76
SEC13-214ENST00000476597 GALNT7Q86SF2 657 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 LAPTM4BQ86VI4 370 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 ZADH2Q8N4Q0 377 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 CSNK1A1LQ8N752 337 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 OR11G2Q8NGC1 345 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 GABPB2Q8TAK5 448 aaPredicted RBP10.28□□□□□ -0.76
SEC13-214ENST00000476597 MCOLN3Q8TDD5 553 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 TM9SF4Q92544 642 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 VPS50Q96JG6 964 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 CABS1Q96KC9 395 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 CCDC138Q96M89 665 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 PRAP1Q96NZ9 151 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 NDNQ99608 321 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 CRB3Q9BUF7 120 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 PLAC1Q9HBJ0 212 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 TMEM184CQ9NVA4 438 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 CUEDC1Q9NWM3 386 aaPredicted RBP10.28□□□□□ -0.76
SEC13-214ENST00000476597 TAS2R13Q9NYV9 303 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 LUZP4Q9P127 313 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 ADAMTS6Q9UKP5 1117 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 PDE10AQ9Y233 779 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 B3GNT3Q9Y2A9 372 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 CENPEQ02224 2701 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 KCNE1BA0A087WTH5 132 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 TCP11X1B4DZS4 312 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 HAT1O14929 419 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 SLC16A5O15375 505 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 FOXS1O43638 330 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 ALOX12BO75342 701 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 C8GP07360 202 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 FBLP22087 321 aaKnown RBP10.27□□□□□ -0.77
SEC13-214ENST00000476597 RGS4P49798 205 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 CDKN2DP55273 166 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 GNG11P61952 73 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 Q0VFX4 171 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 DSG2Q14126 1118 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 FAM53BQ14153 422 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 MORF4L2Q15014 288 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 TUBB8Q3ZCM7 444 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 PRR30Q53SZ7 412 aaPredicted RBP10.27□□□□□ -0.77
SEC13-214ENST00000476597 RBM20Q5T481 1227 aaKnown RBP10.27□□□□□ -0.77
SEC13-214ENST00000476597 THEMIS2Q5TEJ8 643 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 ADCK2Q7Z695 626 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 PLD3Q8IV08 490 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 PARP9Q8IXQ6 854 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 PRSS58Q8IYP2 241 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 PDIK1LQ8N165 341 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 RERGQ96A58 199 aaPredicted RBP10.27□□□□□ -0.77
SEC13-214ENST00000476597 SNRNP40Q96DI7 357 aaKnown RBP10.27□□□□□ -0.77
SEC13-214ENST00000476597 C19orf60Q96EN9 201 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 CERS2Q96G23 380 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 CAPZA3Q96KX2 299 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 PWWP2AQ96N64 755 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 RUNDC3BQ96NL0 473 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 MESP1Q9BRJ9 268 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 TGIF2Q9GZN2 237 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 LHPPQ9H008 270 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 PCBD2Q9H0N5 130 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 PARVBQ9HBI1 364 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 ABCF3Q9NUQ8 709 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 C3orf18Q9UK00 162 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 SAR1BQ9Y6B6 198 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 FER1L5A0AVI2 2057 aa10.27□□□□□ -0.77
SEC13-214ENST00000476597 DOPEY2Q9Y3R5 2298 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 PRPF4O43172 522 aaKnown RBP eCLIP10.26□□□□□ -0.77
SEC13-214ENST00000476597 SNRNP200O75643 2136 aaKnown RBP10.26□□□□□ -0.77
SEC13-214ENST00000476597 TSPAN12O95859 305 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 HPP00738 406 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 ELK3P41970 407 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 EMP2P54851 167 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 DR1Q01658 176 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 SP140Q13342 867 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 FRG1Q14331 258 aaKnown RBP10.26□□□□□ -0.77
SEC13-214ENST00000476597 ZXDCQ2QGD7 858 aaPredicted RBP10.26□□□□□ -0.77
SEC13-214ENST00000476597 AGAP7PQ5VUJ5 663 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 HIBCHQ6NVY1 386 aaPredicted RBP10.26□□□□□ -0.77
SEC13-214ENST00000476597 AGTRAPQ6RW13 159 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 NDUFAF7Q7L592 441 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 VN1R4Q7Z5H5 301 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 KLHL7Q8IXQ5 586 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 PALM2Q8IXS6 379 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 IQCKQ8N0W5 287 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 MYO1HQ8N1T3 1032 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 CISD2Q8N5K1 135 aaKnown RBP10.26□□□□□ -0.77
SEC13-214ENST00000476597 AMER3Q8N944 861 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 C8orf44Q96CB5 159 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 LRRC39Q96DD0 335 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 TM4SF19Q96DZ7 209 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 THAP11Q96EK4 314 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 MMABQ96EY8 250 aaPredicted RBP10.26□□□□□ -0.77
SEC13-214ENST00000476597 PDLIM2Q96JY6 352 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 AGAP4Q96P64 663 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 PSMG3-AS1Q96PY0 264 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 YIPF2Q9BWQ6 316 aa10.26□□□□□ -0.77
SEC13-214ENST00000476597 ATG10Q9H0Y0 220 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms