RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 MYBL1P10243 752 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 EPCAMP16422 314 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 ACSM1Q08AH1 577 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 SGCGQ13326 291 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 PSMD6Q15008 389 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 PTPN14Q15678 1187 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 MFN1Q8IWA4 741 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 RASGEF1AQ8N9B8 481 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 TDRD5Q8NAT2 981 aaKnown RBP5.38□□□□□ -1.55
SMC5-203ENST00000475540 PROX1Q92786 737 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 OMA1Q96E52 524 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 MUS81Q96NY9 551 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 EGFL8Q99944 293 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 SLC2A11Q9BYW1 496 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 TEX10Q9NXF1 929 aaPredicted RBP5.38□□□□□ -1.55
SMC5-203ENST00000475540 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.38□□□□□ -1.55
SMC5-203ENST00000475540 CSNK1G3Q9Y6M4 447 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 ARID2Q68CP9 1835 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 TRBV5-5A0A0J9YX44 114 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 A0A1W2PPK0 400 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 IDH3BO43837 385 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 CYP11B2P19099 503 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 ACHEP22303 614 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 XGP55808 180 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 TMEM50BP56557 158 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 SLC8A3P57103 927 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 LMO4P61968 165 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 NFATC2Q13469 925 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 KRT71Q3SY84 523 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 KRT80Q6KB66 452 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 NOTUMQ6P988 496 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 LEKR1Q6ZMV7 388 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 METTL21AQ8WXB1 218 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 PGAP3Q96FM1 320 aaPredicted RBP5.37□□□□□ -1.55
SMC5-203ENST00000475540 CFAP57Q96MR6 1250 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 LRRC3BQ96PB8 259 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 ZNF300Q96RE9 604 aaPredicted RBP5.37□□□□□ -1.55
SMC5-203ENST00000475540 MAP3K3Q99759 626 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 PA2G4Q9UQ80 394 aaKnown RBP5.37□□□□□ -1.55
SMC5-203ENST00000475540 IGSF1Q8N6C5 1336 aa5.37□□□□□ -1.55
SMC5-203ENST00000475540 A0A087WUV0 522 aaPredicted RBP5.36□□□□□ -1.55
SMC5-203ENST00000475540 AP5Z1O43299 807 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 CPT2P23786 658 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 AZGP1P25311 298 aaKnown RBP5.36□□□□□ -1.55
SMC5-203ENST00000475540 CD27P26842 260 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 CETN2P41208 172 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 MS4A2Q01362 244 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 ROR1Q01973 937 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 CDH18Q13634 790 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 RAPSNQ13702 412 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 ENPP2Q13822 863 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 MOGAT2Q3SYC2 334 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 GPR33Q49SQ1 333 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 CST9LP1Q5W188 147 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 RBPMS2Q6ZRY4 209 aaKnown RBP5.36□□□□□ -1.55
SMC5-203ENST00000475540 CHMP1BQ7LBR1 199 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 FAM89BQ8N5H3 189 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 KLHDC1Q8N7A1 406 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 PRSS33Q8NF86 280 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 GPATCH1Q9BRR8 931 aaKnown RBP5.36□□□□□ -1.55
SMC5-203ENST00000475540 B3GAT2Q9NPZ5 323 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 WDR35Q9P2L0 1181 aa5.36□□□□□ -1.55
SMC5-203ENST00000475540 NFKBIL1Q9UBC1 381 aaPredicted RBP5.36□□□□□ -1.55
SMC5-203ENST00000475540 COL5A2P05997 1499 aaPredicted RBP5.36□□□□□ -1.55
SMC5-203ENST00000475540 RPGRIP1LQ68CZ1 1315 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 TRAV24A0A0B4J272 114 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 SOCS3O14543 225 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 P4HA2O15460 535 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 DKC1O60832 514 aaKnown RBP eCLIP5.35□□□□□ -1.55
SMC5-203ENST00000475540 SLCO2B1O94956 709 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 MYL6BP14649 208 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 ELAVL4P26378 380 aaKnown RBP5.35□□□□□ -1.55
SMC5-203ENST00000475540 SHC1P29353 583 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 DSCR10P59022 87 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 CALCOCO2Q13137 446 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 TRIM29Q14134 588 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 MTF1Q14872 753 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 OPCMLQ14982 345 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 CTR9Q6PD62 1173 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 PAQR6Q6TCH4 344 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 KIF6Q6ZMV9 814 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 TLK2Q86UE8 772 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 XXYLT1Q8NBI6 393 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 OR5T2Q8NGG2 359 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 ZMAT2Q96NC0 199 aaKnown RBP5.35□□□□□ -1.55
SMC5-203ENST00000475540 DNAJC4Q9NNZ3 241 aa5.35□□□□□ -1.55
SMC5-203ENST00000475540 ZCCHC17Q9NP64 241 aaKnown RBP5.35□□□□□ -1.55
SMC5-203ENST00000475540 CFDP1Q9UEE9 299 aaPredicted RBP5.35□□□□□ -1.55
SMC5-203ENST00000475540 ATP6AP2O75787 350 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 GSRP00390 522 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 ATP1B1P05026 303 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 HSD17B3P37058 310 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 SOX3P41225 446 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 RASGEF1BQ0VAM2 473 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 TMEM132DQ14C87 1099 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 NONOQ15233 471 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMC5-203ENST00000475540 TAB1Q15750 504 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 GLIPR1L2Q4G1C9 344 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 CES4AQ5XG92 561 aa5.34□□□□□ -1.55
SMC5-203ENST00000475540 FCRLAQ7L513 359 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms