RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 FKBP9O95302 570 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 CBX6O95503 412 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 PDYNP01213 254 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 THRAP10827 490 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 IDO1P14902 403 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 NCF2P19878 526 aaPredicted RBP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 HRH2P25021 359 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 GSTM2P28161 218 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 PTPN4P29074 926 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 PEBP1P30086 187 aaKnown RBP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 SERPINB1P30740 379 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 SHMT2P34897 504 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 CPOXP36551 454 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 PIK3CBP42338 1070 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 CTSKP43235 329 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ZFP36L2P47974 494 aaKnown RBP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 FASLGP48023 281 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 FNTBP49356 437 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 AFF3P51826 1226 aaKnown RBP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 MNAT1P51948 309 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 C21orf58P58505 322 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 HNRNPKP61978 463 aaKnown RBP eCLIP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 REEP5Q00765 189 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 TBL3Q12788 808 aaKnown RBP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 TCF15Q12870 199 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 PRKG2Q13237 762 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 MAD2L1Q13257 205 aaPredicted RBP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ELOCQ15369 112 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 CPSF6Q16630 551 aaKnown RBP eCLIP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 AP5B1Q2VPB7 878 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ATP6AP1LQ52LC2 224 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 RFTN2Q52LD8 501 aaPredicted RBP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 XKR6Q5GH73 641 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 COQ5Q5HYK3 327 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 CATSPEREQ5SY80 951 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 XP32Q5T750 250 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ZNF425Q6IV72 752 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 MED27Q6P2C8 311 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 AMIGO1Q86WK6 493 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ZFAND4Q86XD8 727 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 DDIASQ8IXT1 998 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ADGRF3Q8IZF5 1079 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 NAGSQ8N159 534 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 TMEM105Q8N8V8 129 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 DCBLD1Q8N8Z6 715 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 LMNTD1Q8N9Z9 388 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 DTWD2Q8NBA8 298 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 AVL9Q8NBF6 648 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 UBE2E3Q969T4 207 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 TUBGCP3Q96CW5 907 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 REPS1Q96D71 796 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 CMTM7Q96FZ5 175 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 MED8Q96G25 268 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 CATSPER2Q96P56 530 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 RTKNQ9BST9 563 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ACPTQ9BZG2 426 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 OSGEPL1Q9H4B0 414 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ACTL8Q9H568 366 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 FARSBQ9NSD9 589 aaKnown RBP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 C1orf109Q9NX04 203 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 TAS2R1Q9NYW7 299 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ZIM2Q9NZV7 527 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ADGRE2Q9UHX3 823 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 PLAGL1Q9UM63 463 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 SH2B3Q9UQQ2 575 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 INVSQ9Y283 1065 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 TDRKHQ9Y2W6 561 aaKnown RBP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 TMED5Q9Y3A6 229 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 FIS1Q9Y3D6 152 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 DYRK1BQ9Y463 629 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 PCDHB11Q9Y5F2 797 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 CFAP20Q9Y6A4 193 aaKnown RBP6.37□□□□□ -1.39
ATG4A-207ENST00000474825 CSNK1G3Q9Y6M4 447 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 CAPN7Q9Y6W3 813 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 LAMA1P25391 3075 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 PRAMEF33A0A0G2JMD5 474 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 A0A1B0GTW7 788 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 PIPSLA2A3N6 862 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 DYTNA2CJ06 578 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 CFAP73A6NFT4 308 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 MEI4A8MW99 385 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 LMO7DNF2Z398 122 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 PSMD12O00232 456 aaPredicted RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 FFAR3O14843 346 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 BCAT2O15382 392 aaPredicted RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 YY2O15391 372 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 GPR42O15529 346 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 PEX11AO75192 247 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 TBX6O95947 436 aaPredicted RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 CELA2BP08218 269 aaPredicted RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 GIMD1P0DJR0 217 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 ESRRAP11474 423 aaPredicted RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 COX4I1P13073 169 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 CD1EP15812 388 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 JAK1P23458 1154 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 CXCR2P25025 360 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 VARSP26640 1264 aaKnown RBP6.36□□□□□ -1.39
ATG4A-207ENST00000474825 MAOBP27338 520 aa6.36□□□□□ -1.39
ATG4A-207ENST00000474825 HOXD12P35452 270 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms