RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 PPP2R2AP63151 447 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 CCDC38Q502W7 563 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 RNFT1Q5M7Z0 435 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 KCTD11Q693B1 232 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 TTC23LQ6PF05 361 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 CPEB2Q7Z5Q1 589 aaKnown RBP11.73□□□□□ -0.53
TRIM13-207ENST00000474805 CDKL3Q8IVW4 592 aaPredicted RBP11.73□□□□□ -0.53
TRIM13-207ENST00000474805 SHISA5Q8N114 240 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 TAB3Q8N5C8 712 aaPredicted RBP11.73□□□□□ -0.53
TRIM13-207ENST00000474805 CSNK1A1LQ8N752 337 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 TMEM178AQ8NBL3 297 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 METTL21AQ8WXB1 218 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 RAD51AP1Q96B01 352 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 LRRC45Q96CN5 670 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 MVB12AQ96EY5 273 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 CHP1Q99653 195 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 NPAS2Q99743 824 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 DPH7Q9BTV6 452 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 ACAT2Q9BWD1 397 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 CARD6Q9BX69 1037 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 RAB11FIP5Q9BXF6 653 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 CCM2LQ9NUG4 571 aaPredicted RBP11.73□□□□□ -0.53
TRIM13-207ENST00000474805 TTC7AQ9ULT0 858 aaPredicted RBP11.73□□□□□ -0.53
TRIM13-207ENST00000474805 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRIM13-207ENST00000474805 NFS1Q9Y697 457 aa11.73□□□□□ -0.53
TRIM13-207ENST00000474805 PHF3Q92576 2039 aaKnown RBP11.72□□□□□ -0.53
TRIM13-207ENST00000474805 A0A0U1RQJ8 604 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 OR2W5A6NFC9 320 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 MROH6A6NGR9 719 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 FAM90A27PA6NNH2 459 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 FOXO6A8MYZ6 492 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 F8W8V4 182 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 C1orf105O95561 183 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 SP1P08047 785 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 PSMA3P25788 255 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 AOAHP28039 575 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 OC90Q02509 493 aaPredicted RBP11.72□□□□□ -0.53
TRIM13-207ENST00000474805 MAPKAPK3Q16644 382 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 MEP1AQ16819 746 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 MFSD4BQ5TF39 518 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 CES4AQ5XG92 561 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 PLAG1Q6DJT9 500 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 SLC25A25Q6KCM7 469 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 DMRTC2Q8IXT2 367 aaPredicted RBP11.72□□□□□ -0.53
TRIM13-207ENST00000474805 KLHDC8BQ8IXV7 354 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 MARVELD2Q8N4S9 558 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 FAM98AQ8NCA5 519 aaKnown RBP11.72□□□□□ -0.53
TRIM13-207ENST00000474805 CHDHQ8NE62 594 aaPredicted RBP11.72□□□□□ -0.53
TRIM13-207ENST00000474805 HDAC10Q969S8 669 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 PPP1R2P1Q96PQ5 205 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 CYTH2Q99418 400 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 FOXC2Q99958 501 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 VN1R1Q9GZP7 353 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 CXXC4Q9H2H0 198 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 RUVBL2Q9Y230 463 aaKnown RBP11.72□□□□□ -0.53
TRIM13-207ENST00000474805 HRH3Q9Y5N1 445 aa11.72□□□□□ -0.53
TRIM13-207ENST00000474805 FLNAP21333 2647 aaKnown RBP11.72□□□□□ -0.53
TRIM13-207ENST00000474805 VPS26AO75436 327 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 NEURL1O76050 574 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 METTL18O95568 372 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 GOT2P00505 430 aaKnown RBP11.71□□□□□ -0.53
TRIM13-207ENST00000474805 CTNNA2P26232 953 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 CMPK1P30085 196 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 PTGER1P34995 402 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 SNRPNP63162 240 aaKnown RBP11.71□□□□□ -0.53
TRIM13-207ENST00000474805 TFF3Q07654 80 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 FOXD4Q12950 439 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-207ENST00000474805 SEMA3AQ14563 771 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 TCEAL1Q15170 157 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 MINDY4Q4G0A6 757 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 GARNL3Q5VVW2 1013 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 LUZP1Q86V48 1076 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 EID3Q8N140 333 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 RAB42Q8N4Z0 105 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 CPSF7Q8N684 471 aaKnown RBP11.71□□□□□ -0.53
TRIM13-207ENST00000474805 OR8K1Q8NGG5 319 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 OR13J1Q8NGT2 312 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 LILRB4Q8NHJ6 448 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 HMGCLL1Q8TB92 370 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 SKA2Q8WVK7 121 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-207ENST00000474805 KRT35Q92764 455 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 TTC1Q99614 292 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 TSSK1BQ9BXA7 367 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 NHEJ1Q9H9Q4 299 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-207ENST00000474805 IFNKQ9P0W0 207 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 SLC2A6Q9UGQ3 507 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 RNF6Q9Y252 685 aa11.71□□□□□ -0.53
TRIM13-207ENST00000474805 R3HDM2Q9Y2K5 976 aaKnown RBP11.71□□□□□ -0.53
TRIM13-207ENST00000474805 A0A1B0GTH9 108 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 SOWAHDA6NJG2 315 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 TMEM200CA6NKL6 621 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 GABRR3A8MPY1 467 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 TOXO94900 526 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 ZWINTO95229 277 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 TPOP07202 933 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 ZNF24P17028 368 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 MSX1P28360 303 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 PTGS2P35354 604 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 PARP6Q2NL67 630 aa11.7□□□□□ -0.54
TRIM13-207ENST00000474805 ZNF468Q5VIY5 522 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms