RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 KIAA1328Q86T90 577 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 PRUNE1Q86TP1 453 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 AMER3Q8N944 861 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 HMGCLL1Q8TB92 370 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 RERGQ96A58 199 aaPredicted RBP13.29□□□□□ -0.28
CCDC78-209ENST00000474647 LACRTQ9GZZ8 138 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 P2RY12Q9H244 342 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 MKKSQ9NPJ1 570 aaPredicted RBP13.29□□□□□ -0.28
CCDC78-209ENST00000474647 CHRAC1Q9NRG0 131 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 RAB6BQ9NRW1 208 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 ABCF3Q9NUQ8 709 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 SPATA7Q9P0W8 599 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 REXO2Q9Y3B8 237 aaKnown RBP13.29□□□□□ -0.28
CCDC78-209ENST00000474647 HCFC1P51610 2035 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 A0A0A6YYC8 382 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-209ENST00000474647 A0A0U1RQJ8 604 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 OR5H15A6NDH6 313 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 BTNL10A8MVZ5 291 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 I3L1I5 382 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-209ENST00000474647 PRAMEF2O60811 474 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 APRTP07741 180 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 MYBL2P10244 700 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 ESRRAP11474 423 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-209ENST00000474647 ETS1P14921 441 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 SESN2P58004 480 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-209ENST00000474647 AP2B1P63010 937 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 CRADDP78560 199 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 MAT1AQ00266 395 aaKnown RBP13.28□□□□□ -0.28
CCDC78-209ENST00000474647 LONRF1Q17RB8 773 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 ZNF630Q2M218 657 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-209ENST00000474647 PRTGQ2VWP7 1150 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 FBXO42Q6P3S6 717 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 LRRC8BQ6P9F7 803 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 ADCK2Q7Z695 626 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 DNAJB8Q8NHS0 232 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 MVB12AQ96EY5 273 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 PLCD4Q9BRC7 762 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 DRC3Q9H069 523 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 ZNF700Q9H0M5 742 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 SYNPO2LQ9H987 977 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 TAC3Q9UHF0 121 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 MKL2Q9ULH7 1088 aa13.28□□□□□ -0.28
CCDC78-209ENST00000474647 A0A1W2PQ72 361 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 A8MUI8 341 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 MIF4GDA9UHW6 222 aaKnown RBP13.27□□□□□ -0.29
CCDC78-209ENST00000474647 FAM227AF5H4B4 570 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 SLC19A2O60779 497 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 SEC24DO94855 1032 aaPredicted RBP13.27□□□□□ -0.29
CCDC78-209ENST00000474647 C8orf89P0DMQ9 161 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 SLC26A3P40879 764 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 SNX1Q13596 522 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.27□□□□□ -0.29
CCDC78-209ENST00000474647 ZNF766Q5HY98 468 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.27□□□□□ -0.29
CCDC78-209ENST00000474647 CTSL3PQ5NE16 218 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 FCRLBQ6BAA4 426 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 LRRC6Q86X45 466 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 ZC3H7AQ8IWR0 971 aaKnown RBP13.27□□□□□ -0.29
CCDC78-209ENST00000474647 SYCE1Q8N0S2 351 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 CCDC89Q8N998 374 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 METTL21AQ8WXB1 218 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 PEX13Q92968 403 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 MAGED4Q96JG8 741 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 DESI2Q9BSY9 194 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 TUBB6Q9BUF5 446 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 RNF32Q9H0A6 362 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 STMN3Q9NZ72 180 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 PCYOX1Q9UHG3 505 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 TEKT2Q9UIF3 430 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 TINAGQ9UJW2 476 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 ZNF148Q9UQR1 794 aa13.27□□□□□ -0.29
CCDC78-209ENST00000474647 SETD2Q9BYW2 2564 aaPredicted RBP13.27□□□□□ -0.29
CCDC78-209ENST00000474647 LOC102723996A0A087X1L8 192 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 IGHV3-20A0A0C4DH32 117 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 ARHGEF33A8MVX0 844 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 P2RX6O15547 441 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 LIASO43766 372 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 PHF2O75151 1096 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 NIPSNAP2O75323 286 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 STATHP02808 62 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 ICAM2P13598 275 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 RPS3P23396 243 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC78-209ENST00000474647 NMBRP28336 390 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 FMO4P31512 558 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 STIP1P31948 543 aaKnown RBP13.26□□□□□ -0.29
CCDC78-209ENST00000474647 ST13P50502 369 aaKnown RBP13.26□□□□□ -0.29
CCDC78-209ENST00000474647 EFNA3P52797 238 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 EMP3P54852 163 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 ADORA2A-AS1P86434 159 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 OASLQ15646 514 aaKnown RBP13.26□□□□□ -0.29
CCDC78-209ENST00000474647 C3AR1Q16581 482 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 BTBD16Q32M84 506 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 ANKRD20A4Q4UJ75 823 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 PCID2Q5JVF3 399 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 SEL1L2Q5TEA6 688 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 XKRXQ6PP77 449 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 LANCL3Q6ZV70 420 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 PAQR7Q86WK9 346 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 PPFIBP2Q8ND30 876 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 OR9A1PQ8NGU1 263 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms