RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 SFXN2Q96NB2 322 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 FRG2BQ96QU4 278 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 CCT8L2Q96SF2 557 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 GPN2Q9H9Y4 310 aaPredicted RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 APOBEC3GQ9HC16 384 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 HPF1Q9NWY4 346 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 DTLQ9NZJ0 730 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 PPP4R1LQ9P1A2 415 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 MARCOQ9UEW3 520 aaPredicted RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 PPIEQ9UNP9 301 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 MMACHCQ9Y4U1 282 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 TOGARAM1Q9Y4F4 1720 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 NPIPA5E9PKD4 350 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 MKRN2OSH3BPM6 223 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 PHGDHO43175 533 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 AQP9O43315 295 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 PRAMEF2O60811 474 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 FAM20BO75063 409 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 C6P13671 934 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 POU1F1P28069 291 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 TEAD1P28347 426 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ADSSP30520 456 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 GATMP50440 423 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 CAMK1Q14012 370 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 IL17AQ16552 155 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 EIF2S3LQ2VIR3 472 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 LEXMQ3ZCV2 418 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 IFI44LQ53G44 452 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM53Q6P2H8 277 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ZBTB49Q6ZSB9 765 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 SYVN1Q86TM6 617 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 DAW1Q8N136 415 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 PLD6Q8N2A8 252 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 CSNK1A1LQ8N752 337 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 SCAMP5Q8TAC9 235 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 GPBAR1Q8TDU6 330 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 SLC9A6Q92581 669 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 NDRG1Q92597 394 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 FAM122AQ96E09 287 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 RPL10LQ96L21 214 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 C7orf26Q96N11 449 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 AGAP2Q99490 1192 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 KIFC1Q9BW19 673 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 CSNK1G1Q9HCP0 422 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 RABL2AQ9UBK7 228 aaPredicted RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 DNAJB4Q9UDY4 337 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 NPIPA1Q9UND3 350 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 RABL2BQ9UNT1 228 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 POFUT2Q9Y2G5 429 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 DHRS7Q9Y394 339 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 SNX13Q9Y5W8 968 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 A0A1W2PRB8 838 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 NDUFS4O43181 175 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ERI3O43414 337 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 CPNE3O75131 537 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 HRGP04196 525 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 GPIP06744 558 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 CCDC159P0C7I6 412 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 C1GALT1C1LP0DN25 315 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 FCGR2AP12318 317 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 IL7RP16871 459 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF12P17014 697 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 CEBPBP17676 345 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 BGNP21810 368 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 CCT3P49368 545 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ATP4BP51164 291 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 GALK1P51570 392 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 CHN2P52757 468 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 STC1P52823 247 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 EPHA4P54764 986 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 NAGLUP54802 743 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 DCDC1P59894 354 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 RAB2AP61019 212 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 UBE2NP61088 152 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 POU6F2P78424 691 aaPredicted RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ARG2P78540 354 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 RPL19P84098 196 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 MGAT3Q09327 533 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 GRIK2Q13002 908 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 MALLQ13021 153 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 MYBPC3Q14896 1274 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 SHHQ15465 462 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM52BQ4KMG9 183 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ARSJQ5FYB0 599 aaPredicted RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 C16orf87Q6PH81 154 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ASB18Q6ZVZ8 466 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 KRT77Q7Z794 578 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 PIGWQ7Z7B1 504 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 S100A7AQ86SG5 101 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 NLRP8Q86W28 1048 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 Q8N9G6 341 aaPredicted RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 CCDC54Q8NEL0 328 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 KBTBD8Q8NFY9 601 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 OR6K2Q8NGY2 324 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 OR4C6Q8NH72 309 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 RHEBL1Q8TAI7 183 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 ZCCHC10Q8TBK6 192 aa4.49□□□□□ -1.69
CCNL1-215ENST00000474539 IMP4Q96G21 291 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 TOE1Q96GM8 510 aaKnown RBP4.49□□□□□ -1.69
CCNL1-215ENST00000474539 PPP1R36Q96LQ0 422 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms