RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CXCR2P25025 360 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 CCR7P32248 378 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 SLC26A3P40879 764 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 ART1P52961 327 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 AP2B1P63010 937 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 PPP2R2AP63151 447 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 ZNF33BQ06732 778 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 HSPA14Q0VDF9 509 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 POU6F1Q14863 301 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 TCEAL1Q15170 157 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 KRTCAP3Q53RY4 240 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 PLAG1Q6DJT9 500 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 TMEM205Q6UW68 189 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 UNC5DQ6UXZ4 953 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 LUZP1Q86V48 1076 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 CDKL3Q8IVW4 592 aaPredicted RBP4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 ZC3H7AQ8IWR0 971 aaKnown RBP4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 RCOR2Q8IZ40 523 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 MMP21Q8N119 569 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 ARHGEF39Q8N4T4 335 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 MDS2Q8NDY4 140 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 OR2L3Q8NG85 312 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 OR2A1Q8NGT9 310 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 CFAP61Q8NHU2 1237 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 HMGCLL1Q8TB92 370 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 ACTL9Q8TC94 416 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 LKAAEAR1Q8TD35 194 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 AGAP11Q8TF27 550 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 PHF10Q8WUB8 498 aaKnown RBP4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 ASZ1Q8WWH4 475 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 KRT35Q92764 455 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 MVB12AQ96EY5 273 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 SCMH1Q96GD3 660 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 CABS1Q96KC9 395 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 IMMP1LQ96LU5 166 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 FRMD6Q96NE9 622 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 SIGLEC12Q96PQ1 595 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 PPP1R2P1Q96PQ5 205 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 DMRTA2Q96SC8 542 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 MIPEPQ99797 713 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 ZFYVE21Q9BQ24 234 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 FERMT1Q9BQL6 677 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 TRIM51Q9BSJ1 452 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 RAB11FIP5Q9BXF6 653 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 HES7Q9BYE0 225 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 TGIF2Q9GZN2 237 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 SYNPO2LQ9H987 977 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 MKKSQ9NPJ1 570 aaPredicted RBP4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 KLHL1Q9NR64 748 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 PIH1D1Q9NWS0 290 aaKnown RBP4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 STMN3Q9NZ72 180 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 TNFRSF10DQ9UBN6 386 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 TEKT2Q9UIF3 430 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 SLC39A10Q9ULF5 831 aa4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 RUVBL1Q9Y265 456 aaKnown RBP4.86□□□□□ -1.63
SNRNP40-204ENST00000474025 GTF3C1Q12789 2109 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 TLN2Q9Y4G6 2542 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 IGKV1-8A0A0C4DH67 115 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 A0A0U1RQJ8 604 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 MACROD2A1Z1Q3 448 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 IQCF5A8MTL0 148 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 A8MUI8 341 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 ESPNB1AK53 854 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 NPIPA5E9PKD4 350 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 E9PLN8 166 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 H0YGG7 62 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 TTI1O43156 1089 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 PRPF4O43172 522 aaKnown RBP eCLIP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 ZNHIT1O43257 154 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 FOXS1O43638 330 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 STK10O94804 968 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 SEC24DO94855 1032 aaPredicted RBP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 C1orf105O95561 183 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 MLYCDO95822 493 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 C8orf89P0DMQ9 161 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 RBP3P10745 1247 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 ABOP16442 354 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 AOAHP28039 575 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 BDKRB1P46663 353 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 HADHBP55084 474 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 EIF3EP60228 445 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 ARF3P61204 181 aaPredicted RBP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 YBX1P67809 324 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 HSF1Q00613 529 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 ALDH6A1Q02252 535 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 TFF3Q07654 80 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 TUBA3CQ13748 450 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 SYT16Q17RD7 645 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 HKDC1Q2TB90 917 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 CCSMST1Q4G0I0 132 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 CCDC38Q502W7 563 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 ACER2Q5QJU3 275 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 CCDC181Q5TID7 509 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 FCRLBQ6BAA4 426 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 H3F3CQ6NXT2 135 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 FBXO42Q6P3S6 717 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 TUBA3EQ6PEY2 450 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 DARS2Q6PI48 645 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 C3P1Q6ZMU1 363 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 LANCL3Q6ZV70 420 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms