RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 TEX51A0A1B0GUA7 166 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 A0A1W2PPM1 405 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 MAP2K7O14733 419 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 HAT1O14929 419 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 ZSCAN9O15535 394 aaPredicted RBP11.89□□□□□ -0.51
DDX56-209ENST00000473924 ZNF749O43361 778 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 SMIM24O75264 130 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 DLGAP3O95886 979 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 KLK3P07288 261 aaPredicted RBP11.89□□□□□ -0.51
DDX56-209ENST00000473924 HBQ1P09105 142 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 GNAZP19086 355 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 GGT5P36269 586 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 SLC6A12P48065 614 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 RPS15AP62244 130 aaKnown RBP11.89□□□□□ -0.51
DDX56-209ENST00000473924 CDC16Q13042 620 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 PRAMEF17Q5VTA0 474 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 BROXQ5VW32 411 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 FRMPD2BQ6IN97 320 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 FBXO42Q6P3S6 717 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 TMPRSS11BQ86T26 416 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 LCA5Q86VQ0 697 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 PLD3Q8IV08 490 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 CYP4X1Q8N118 509 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 TBC1D19Q8N5T2 526 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 ESX1Q8N693 406 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 ZNF655Q8N720 491 aaPredicted RBP11.89□□□□□ -0.51
DDX56-209ENST00000473924 SNX31Q8N9S9 440 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 TTC29Q8NA56 475 aaPredicted RBP11.89□□□□□ -0.51
DDX56-209ENST00000473924 MZB1Q8WU39 189 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 NEIL2Q969S2 332 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 MRPL57Q9BQC6 102 aaKnown RBP11.89□□□□□ -0.51
DDX56-209ENST00000473924 CAPS2Q9BXY5 557 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 CD244Q9BZW8 370 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 SPRY4Q9C004 299 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 MRPL46Q9H2W6 279 aaKnown RBP11.89□□□□□ -0.51
DDX56-209ENST00000473924 TXLNGQ9NUQ3 528 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 DNAJC11Q9NVH1 559 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 XPR1Q9UBH6 696 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 OPTCQ9UBM4 332 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 ANGPTL3Q9Y5C1 460 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 FRYQ5TBA9 3013 aa11.89□□□□□ -0.51
DDX56-209ENST00000473924 SDK2Q58EX2 2172 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 LOC105369274A0A096LPK9 316 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 LOC102723532A0A0G2JNH3 316 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 FEZF1A0PJY2 475 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 CCDC151A5D8V7 595 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 FOXO6A8MYZ6 492 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 H0YGG7 62 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 CLGNO14967 610 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 CTSBP07858 339 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 GSTA1P08263 222 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 MTHFD2P13995 350 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 ARSFP54793 590 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 ALDH18A1P54886 795 aaKnown RBP11.88□□□□□ -0.51
DDX56-209ENST00000473924 ARF3P61204 181 aaPredicted RBP11.88□□□□□ -0.51
DDX56-209ENST00000473924 CSNK1G2P78368 415 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 MEF2AQ02078 507 aaPredicted RBP11.88□□□□□ -0.51
DDX56-209ENST00000473924 RELAQ04206 551 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 CLN3Q13286 438 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 MAP7Q14244 749 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 GRM7Q14831 915 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 PDK4Q16654 411 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 WASHC2DQ5SRD0 308 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 MANEAQ5SRI9 462 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 CATSPEREQ5SY80 951 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 LRRC70Q7Z2Q7 622 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 TIPARPQ7Z3E1 657 aaKnown RBP11.88□□□□□ -0.51
DDX56-209ENST00000473924 DTX1Q86Y01 620 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 SPACA3Q8IXA5 215 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 KLHDC8AQ8IYD2 350 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 OR4N4Q8N0Y3 316 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 NKD1Q969G9 470 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 KIAA1143Q96AT1 154 aaPredicted RBP11.88□□□□□ -0.51
DDX56-209ENST00000473924 NLNQ9BYT8 704 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 PELI2Q9HAT8 420 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 STARD5Q9NSY2 213 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 GPRC5BQ9NZH0 403 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 DCDC2Q9UHG0 476 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 PADI1Q9ULC6 663 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 TMCO1Q9UM00 188 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 SRPK3Q9UPE1 567 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 IGF2RP11717 2491 aa11.88□□□□□ -0.51
DDX56-209ENST00000473924 SRRM3A6NNA2 597 aaPredicted RBP11.87□□□□□ -0.51
DDX56-209ENST00000473924 H3BMH7 237 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 K7EPI3 171 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 TK2O00142 265 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 TXNDC9O14530 226 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 COPEO14579 308 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 OR1F1O43749 312 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 GLRA3O75311 464 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 H2AFYO75367 372 aaKnown RBP11.87□□□□□ -0.51
DDX56-209ENST00000473924 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 KRT4P19013 534 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 TAC1P20366 129 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 ALAS2P22557 587 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 CCT5P48643 541 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 AGTR2P50052 363 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 ABHD18Q0P651 414 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 SETDB1Q15047 1291 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 FAM214AQ32MH5 1076 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms