RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CTNNAL1Q9UBT7 734 aa18.1■□□□□ 0.49
PTCD3-210ENST00000473829 NFU1Q9UMS0 254 aa18.1■□□□□ 0.49
PTCD3-210ENST00000473829 SNX7Q9UNH6 387 aa18.1■□□□□ 0.49
PTCD3-210ENST00000473829 OARD1Q9Y530 152 aa18.1■□□□□ 0.49
PTCD3-210ENST00000473829 A0A1B0GX78 115 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 HMX2A2RU54 273 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 EIF2S1P05198 315 aaKnown RBP18.09■□□□□ 0.49
PTCD3-210ENST00000473829 CCDC166P0CW27 439 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 NPPBP16860 134 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 AGXTP21549 392 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 RAB10P61026 200 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 BMPR2Q13873 1038 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 PRTGQ2VWP7 1150 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 BORAQ6PGQ7 559 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 LCTLQ6UWM7 567 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 COX15Q7KZN9 410 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 SYVN1Q86TM6 617 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 METTL27Q8N6F8 245 aaPredicted RBP18.09■□□□□ 0.49
PTCD3-210ENST00000473829 TTC29Q8NA56 475 aaPredicted RBP18.09■□□□□ 0.49
PTCD3-210ENST00000473829 LSM14AQ8ND56 463 aaKnown RBP18.09■□□□□ 0.49
PTCD3-210ENST00000473829 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.09■□□□□ 0.49
PTCD3-210ENST00000473829 UBXN10Q96LJ8 280 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 C10orf90Q96M02 699 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 CATSPER2Q96P56 530 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 FUT8Q9BYC5 575 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 PCBD2Q9H0N5 130 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 L2HGDHQ9H9P8 463 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 TCFL5Q9UL49 500 aa18.09■□□□□ 0.49
PTCD3-210ENST00000473829 PABPN1LA6NDY0 278 aaKnown RBP18.08■□□□□ 0.48
PTCD3-210ENST00000473829 C9J4A7 227 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 DSCR3O14972 297 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 P2RX6O15547 441 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 C1QL1O75973 258 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 SLC35E2BP0CK96 405 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 CDH1P12830 882 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 CD1DP15813 335 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 ALAS2P22557 587 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 CCND1P24385 295 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 PHBP35232 272 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 ARSFP54793 590 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 SNRPNP63162 240 aaKnown RBP18.08■□□□□ 0.48
PTCD3-210ENST00000473829 CSNK1G2P78368 415 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 DCDP81605 110 aaKnown RBP18.08■□□□□ 0.48
PTCD3-210ENST00000473829 DLG1Q12959 904 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 OR4D1Q15615 310 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 UGT8Q16880 541 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 HKDC1Q2TB90 917 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 C18orf21Q32NC0 220 aaPredicted RBP18.08■□□□□ 0.48
PTCD3-210ENST00000473829 NKAIN1Q4KMZ8 207 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 MLIPQ5VWP3 458 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 CAPN13Q6MZZ7 669 aaPredicted RBP18.08■□□□□ 0.48
PTCD3-210ENST00000473829 CEP128Q6ZU80 1094 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 ADAMTSL2Q86TH1 951 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 C17orf64Q86WR6 236 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 PTERQ96BW5 349 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 CYTH2Q99418 400 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 TMEM184CQ9NVA4 438 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 NDOR1Q9UHB4 597 aa18.08■□□□□ 0.48
PTCD3-210ENST00000473829 RUVBL1Q9Y265 456 aaKnown RBP18.08■□□□□ 0.48
PTCD3-210ENST00000473829 HYKKA2RU49 373 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 KLF7O75840 302 aaPredicted RBP18.07■□□□□ 0.48
PTCD3-210ENST00000473829 RECKO95980 971 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 STATHP02808 62 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 CSRP3P50461 194 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 CDKL1Q00532 357 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 RELAQ04206 551 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 CSHL1Q14406 222 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 MRPL14Q6P1L8 145 aaKnown RBP18.07■□□□□ 0.48
PTCD3-210ENST00000473829 VN1R4Q7Z5H5 301 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 ARHGEF39Q8N4T4 335 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 CSNK1A1LQ8N752 337 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 ADAMTS17Q8TE56 1095 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 ATL1Q8WXF7 558 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 TSPYL1Q9H0U9 437 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 IFT80Q9P2H3 777 aaPredicted RBP18.07■□□□□ 0.48
PTCD3-210ENST00000473829 KCNMB2Q9Y691 235 aa18.07■□□□□ 0.48
PTCD3-210ENST00000473829 TK2O00142 265 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 OR1D4P47884 311 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 POLE2P56282 527 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 TGFBIQ15582 683 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 UAP1Q16222 522 aaPredicted RBP18.06■□□□□ 0.48
PTCD3-210ENST00000473829 MROH9Q5TGP6 573 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 YOD1Q5VVQ6 348 aaPredicted RBP18.06■□□□□ 0.48
PTCD3-210ENST00000473829 FRA10AC1Q70Z53 315 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 IFT20Q8IY31 132 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 GSPT2Q8IYD1 628 aaKnown RBP18.06■□□□□ 0.48
PTCD3-210ENST00000473829 UHMK1Q8TAS1 419 aaKnown RBP18.06■□□□□ 0.48
PTCD3-210ENST00000473829 NEIL2Q969S2 332 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 TSNARE1Q96NA8 513 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 EGFL8Q99944 293 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 ARHGAP9Q9BRR9 750 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 HAUS8Q9BT25 410 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 DHRS4Q9BTZ2 278 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 FAM117AQ9C073 453 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 SPNS1Q9H2V7 528 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 POLHQ9Y253 713 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 MAU2Q9Y6X3 613 aa18.06■□□□□ 0.48
PTCD3-210ENST00000473829 FEZF1A0PJY2 475 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 NCF1BA6NI72 391 aaPredicted RBP18.05■□□□□ 0.48
PTCD3-210ENST00000473829 NCF1CA8MVU1 366 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms