RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 COX7A2P14406 83 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ENGP17813 658 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ACRV1P26436 265 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ALDH4A1P30038 563 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 GJA5P36382 358 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 CSNK1DP48730 415 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 OR2B6P58173 313 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 HMGCS1Q01581 520 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 LRIT3Q3SXY7 679 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ZFP69Q49AA0 526 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 IFI44LQ53G44 452 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 CARD16Q5EG05 197 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 MEDAGQ5VYS4 303 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 RETSATQ6NUM9 610 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 CCBE1Q6UXH8 406 aaPredicted RBP5.94□□□□□ -1.46
HERC4-209ENST00000473533 BTLAQ7Z6A9 289 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 PHACTR4Q8IZ21 702 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 PARP16Q8N5Y8 322 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 LILRB4Q8NHJ6 448 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 FCRL1Q96LA6 429 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 SLC30A2Q9BRI3 323 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 DOHHQ9BU89 302 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 TTLL2Q9BWV7 592 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 TPK1Q9H3S4 243 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 IKZF5Q9H5V7 419 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ZFYVE1Q9HBF4 777 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 DDX28Q9NUL7 540 aaKnown RBP5.94□□□□□ -1.46
HERC4-209ENST00000473533 DNAJC11Q9NVH1 559 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 PCDHGA3Q9Y5H0 932 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 ZFP37Q9Y6Q3 630 aaPredicted RBP5.94□□□□□ -1.46
HERC4-209ENST00000473533 PMF1-BGLAPU3KQ54 211 aa5.94□□□□□ -1.46
HERC4-209ENST00000473533 TRBV5-4A0A0C4DH59 114 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 CCRL2O00421 344 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 PRSS56P0CW18 603 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 HOXB9P17482 250 aaPredicted RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 CD6P30203 668 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 DDOSTP39656 456 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 THPOP40225 353 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 PIK3CBP42338 1070 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 BEX3Q00994 111 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ARMC4Q5T2S8 1044 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 GPRC6AQ5T6X5 926 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 SYCE2Q6PIF2 218 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 SUSD1Q6UWL2 747 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 MOB2Q70IA6 237 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 NANOGNBQ7Z5D8 188 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 DSG4Q86SJ6 1040 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 NLRP8Q86W28 1048 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 RNF130Q86XS8 419 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ENTHD1Q8IYW4 607 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 KRTCAP2Q8N6L1 136 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 DCBLD1Q8N8Z6 715 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 REPS1Q96D71 796 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 CDCA4Q9BXL8 241 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 NDEL1Q9GZM8 345 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 REXO4Q9GZR2 422 aaKnown RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 DNMT3BQ9UBC3 853 aaKnown RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 STUB1Q9UNE7 303 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 CAB39Q9Y376 341 aaPredicted RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 GLYATL1P3A0A0U1RQE8 302 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 CXorf51AA0A1B0GTR3 108 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 E9PQ18 207 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 SCAMP3O14828 347 aaKnown RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 AOC2O75106 756 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 PDE9AO76083 593 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 LCKP06239 509 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 GADD45AP24522 165 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 CD52P31358 61 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 RPIAP49247 311 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 TUFMP49411 452 aaKnown RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 PCDH1Q08174 1060 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 DSC1Q08554 894 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 GPR17Q13304 367 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 NFATC2Q13469 925 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 C1DQ13901 141 aaKnown RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 HKDC1Q2TB90 917 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 FAM26DQ5JW98 314 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 HECTD3Q5T447 861 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 FRG2Q64ET8 278 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 NADSYN1Q6IA69 706 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ZNF621Q6ZSS3 439 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 CIR1Q86X95 450 aaPredicted RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 METTL4Q8N3J2 472 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ASCC1Q8N9N2 400 aaKnown RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 OR10G2Q8NGC3 310 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 BRI3BPQ8WY22 251 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 MS4A4AQ96JQ5 239 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 TRNT1Q96Q11 434 aaKnown RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 DEPDC7Q96QD5 511 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 FRG2BQ96QU4 278 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 HHIPQ96QV1 700 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ACPTQ9BZG2 426 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 RASSF1Q9NS23 344 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 THSD1Q9NS62 852 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 SACM1LQ9NTJ5 587 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 EXD2Q9NVH0 621 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 DKK3Q9UBP4 350 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 PHF11Q9UIL8 331 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ABCG2Q9UNQ0 655 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms