RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 DMRTA2Q96SC8 542 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 SLC30A3Q99726 388 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 BAG1Q99933 345 aaPredicted RBP9.1□□□□□ -0.95
MCF2L-223ENST00000473345 ZFYVE21Q9BQ24 234 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 PLCD4Q9BRC7 762 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 TRIM51Q9BSJ1 452 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 TGIF2Q9GZN2 237 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 ETNK1Q9HBU6 452 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 NPDC1Q9NQX5 325 aaPredicted RBP9.1□□□□□ -0.95
MCF2L-223ENST00000473345 KLHL1Q9NR64 748 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 STMN3Q9NZ72 180 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 IL1RAPL1Q9NZN1 696 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 SUCOQ9UBS9 1254 aaKnown RBP9.1□□□□□ -0.95
MCF2L-223ENST00000473345 SLC39A10Q9ULF5 831 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 TTC7AQ9ULT0 858 aaPredicted RBP9.1□□□□□ -0.95
MCF2L-223ENST00000473345 ASB1Q9Y576 335 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 ZNF469Q96JG9 3925 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-223ENST00000473345 ASPDHA6ND91 283 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 SOWAHDA6NJG2 315 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 A8MUI8 341 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 NPIPA5E9PKD4 350 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 QSOX1O00391 747 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 WFS1O76024 890 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 NEURL1O76050 574 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 CLDN14O95500 239 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 IGFBP2P18065 325 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 PLOD1Q02809 727 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-223ENST00000473345 TLE4Q04727 773 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 MUM1Q2TAK8 710 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 AFTPHQ6ULP2 937 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 VN1R4Q7Z5H5 301 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 DOLPP1Q86YN1 238 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 SPPL2CQ8IUH8 684 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 CRLF3Q8IUI8 442 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 LRRC56Q8IYG6 542 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-223ENST00000473345 CSNK1A1LQ8N752 337 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 OR4L1Q8NH43 312 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 DNAJB8Q8NHS0 232 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 ASZ1Q8WWH4 475 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 SLC22A18Q96BI1 424 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 MMABQ96EY8 250 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-223ENST00000473345 C14orf79Q96F83 325 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 SCMH1Q96GD3 660 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 BIRC8Q96P09 236 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 YIPF2Q9BWQ6 316 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 CHRAC1Q9NRG0 131 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 INTS7Q9NVH2 962 aaKnown RBP9.09□□□□□ -0.95
MCF2L-223ENST00000473345 RIC8BQ9NVN3 520 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 ZNHIT6Q9NWK9 470 aaKnown RBP9.09□□□□□ -0.95
MCF2L-223ENST00000473345 MKL2Q9ULH7 1088 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 PYCARDQ9ULZ3 195 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 NPIPA1Q9UND3 350 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 SH2B3Q9UQQ2 575 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 TCAF1Q9Y4C2 921 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 MTORP42345 2549 aa9.09□□□□□ -0.95
MCF2L-223ENST00000473345 PCNX1Q96RV3 2341 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 ESPNB1AK53 854 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 GOLGA8KD6RF30 607 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 FAM227AF5H4B4 570 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 GOLGA8TH3BQL2 631 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 HAT1O14929 419 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 NIPSNAP2O75323 286 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 ZNF189O75820 626 aaPredicted RBP9.08□□□□□ -0.96
MCF2L-223ENST00000473345 SUN1O94901 812 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 MATN4O95460 622 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 CRYABP02511 175 aaKnown RBP9.08□□□□□ -0.96
MCF2L-223ENST00000473345 HEXBP07686 556 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 ZSCAN5DPP0CG00 497 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 AGAP20933 346 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 FDXRP22570 491 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 NMBRP28336 390 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 SSTR2P30874 369 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 TFF3Q07654 80 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 KCNJ11Q14654 390 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 ACSBG2Q5FVE4 666 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 ACER2Q5QJU3 275 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 ABHD17BQ5VST6 288 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 CES3Q6UWW8 571 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 RIPOR1Q6ZS17 1223 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 PDSS2Q86YH6 399 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 CEP97Q8IW35 865 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 KIF2BQ8N4N8 673 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 OR9A4Q8NGU2 314 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 OR6P1Q8NGX9 317 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 AGAP11Q8TF27 550 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 THAP3Q8WTV1 239 aaPredicted RBP9.08□□□□□ -0.96
MCF2L-223ENST00000473345 RAD51AP1Q96B01 352 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 CYTH2Q99418 400 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 PKP4Q99569 1192 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 MCCC2Q9HCC0 563 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 TREX1Q9NSU2 369 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 RIMKLBQ9ULI2 386 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 MED16Q9Y2X0 877 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 FAM169AQ9Y6X4 670 aa9.08□□□□□ -0.96
MCF2L-223ENST00000473345 PRMT5O14744 637 aaPredicted RBP9.07□□□□□ -0.96
MCF2L-223ENST00000473345 NRDCO43847 1150 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 ZNF500O60304 480 aaPredicted RBP9.07□□□□□ -0.96
MCF2L-223ENST00000473345 STK10O94804 968 aaKnown RBP9.07□□□□□ -0.96
MCF2L-223ENST00000473345 B3GALT4O96024 378 aa9.07□□□□□ -0.96
MCF2L-223ENST00000473345 APOA4P06727 396 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms