RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 G3V3Y1 287 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 SMAD9O15198 467 aaKnown RBP6.08□□□□□ -1.44
HDAC3-206ENST00000471968 EPB41L2O43491 1005 aaKnown RBP6.08□□□□□ -1.44
HDAC3-206ENST00000471968 DLX3O60479 287 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 IL18BPO95998 194 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 SLC4A1P02730 911 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 TUBB4AP04350 444 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 POLBP06746 335 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 MAGP20916 626 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 GGT5P36269 586 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 DSCR9P59020 149 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 HILS1P60008 231 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 IL10RBQ08334 325 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 FOXF2Q12947 444 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 C15orf59Q2T9L4 293 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-206ENST00000471968 MFSD4BQ5TF39 518 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 PDPK2PQ6A1A2 396 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 TMEM220Q6QAJ8 160 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 SARM1Q6SZW1 724 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 SH2D5Q6ZV89 423 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 NOP9Q86U38 636 aaKnown RBP6.08□□□□□ -1.44
HDAC3-206ENST00000471968 SLC26A11Q86WA9 606 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 RASGEF1AQ8N9B8 481 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 SNX31Q8N9S9 440 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 PHC3Q8NDX5 983 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 OR2M7Q8NG81 312 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 FLVCR1-AS1Q8TAF5 88 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 RXFP2Q8WXD0 754 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 NTNG2Q96CW9 530 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 MGME1Q9BQP7 344 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 C11orf70Q9BRQ4 267 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 CNPY3Q9BT09 278 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 HGH1Q9BTY7 390 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 C19orf25Q9UFG5 118 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-206ENST00000471968 KLHL21Q9UJP4 597 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 TMPRSS11EQ9UL52 423 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 ICKQ9UPZ9 632 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 CLIC4Q9Y696 253 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.08□□□□□ -1.44
HDAC3-206ENST00000471968 ALPK2Q86TB3 2170 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 PVALEFA0A1B0GWK0 134 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 AHRRA9YTQ3 701 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 H3BRJ5 948 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 FCHO1O14526 889 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 GLSO94925 669 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 CHRM5P08912 532 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 COL6A2P12110 1019 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 RPL13P26373 211 aaKnown RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 HSPA9P38646 679 aaKnown RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 MCCD1P59942 119 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 CUL4BQ13620 913 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 SLC10A1Q14973 349 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 CA9Q16790 459 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 SYT16Q17RD7 645 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 MINDY4Q4G0A6 757 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 WASHC2DQ5SRD0 308 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 FNBP1LQ5T0N5 605 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 NDUFAF5Q5TEU4 345 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 PAPD4Q6PIY7 484 aaKnown RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 UNC5AQ6ZN44 842 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 RINLQ6ZS11 566 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 MILR1Q7Z6M3 343 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 ARHGEF19Q8IW93 802 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 ZC3H7AQ8IWR0 971 aaKnown RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 LILRA3Q8N6C8 439 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 EMC1Q8N766 993 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 ZNF525Q8N782 197 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 LPCAT1Q8NF37 534 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 FBF1Q8TES7 1133 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 EID2BQ96D98 161 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 LYSMD1Q96S90 227 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 CCT8L2Q96SF2 557 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 CYTH2Q99418 400 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 TGIF2Q9GZN2 237 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 VN1R1Q9GZP7 353 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 MKKSQ9NPJ1 570 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 TIMMDC1Q9NPL8 285 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 NLRC4Q9NPP4 1024 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 ZC3H7BQ9UGR2 993 aaKnown RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 TMEFF2Q9UIK5 374 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-206ENST00000471968 IKZF3Q9UKT9 509 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 CHKBQ9Y259 395 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 PCDHGB3Q9Y5G1 929 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 PCDHA13Q9Y5I0 950 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 DNAH3Q8TD57 4116 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 ABCA13Q86UQ4 5058 aa6.07□□□□□ -1.44
HDAC3-206ENST00000471968 OR2W5A6NFC9 320 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 MGAT4DA6NG13 374 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 ARHGEF33A8MVX0 844 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 A8MXE2 369 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 ISM1B1AKI9 464 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 H3BQV1 296 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 SCAMP2O15127 329 aaKnown RBP6.06□□□□□ -1.44
HDAC3-206ENST00000471968 FGF10O15520 208 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-206ENST00000471968 HCN1O60741 890 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 EIF2S1P05198 315 aaKnown RBP6.06□□□□□ -1.44
HDAC3-206ENST00000471968 DANCRP0C864 163 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 HKR1P10072 659 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 EPB41P11171 864 aaKnown RBP6.06□□□□□ -1.44
HDAC3-206ENST00000471968 APEHP13798 732 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms