RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 MAGEB16A2A368 324 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 PRDM1O75626 825 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 CPA3P15088 417 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 GDF5P43026 501 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 HNRNPFP52597 415 aaKnown RBP6.16□□□□□ -1.42
SMC5-202ENST00000471372 B3GALT5-AS1P59052 145 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 MBTD1Q05BQ5 628 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 TAF10Q12962 218 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 ACKR1Q16570 336 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 CCDC40Q4G0X9 1142 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 STXBP5Q5T5C0 1151 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 OR4A47Q6IF82 309 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 PIM3Q86V86 326 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 PRIMA1Q86XR5 153 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 KMT5CQ86Y97 462 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.16□□□□□ -1.42
SMC5-202ENST00000471372 CLIP4Q8N3C7 705 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 ABHD8Q96I13 439 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 NSMCE2Q96MF7 247 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 FAM213AQ9BRX8 229 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 TRMT61BQ9BVS5 477 aaKnown RBP6.16□□□□□ -1.42
SMC5-202ENST00000471372 ZMYND12Q9H0C1 365 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 DDX47Q9H0S4 455 aaKnown RBP6.16□□□□□ -1.42
SMC5-202ENST00000471372 RIMS4Q9H426 269 aaPredicted RBP6.16□□□□□ -1.42
SMC5-202ENST00000471372 TLE6Q9H808 572 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 NGBQ9NPG2 151 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 SOHLH2Q9NX45 425 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 DONSONQ9NYP3 566 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 KCNN3Q9UGI6 736 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 MYO6Q9UM54 1294 aa6.16□□□□□ -1.42
SMC5-202ENST00000471372 IGLV5-37A0A075B6J1 123 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 CTAGE9A4FU28 777 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 ARHGAP42A6NI28 874 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 SRRM3A6NNA2 597 aaPredicted RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 SLC28A2O43868 658 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 AKR7A3O95154 331 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 BAG3O95817 575 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 TMEM191BP0C7N4 346 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 CTAGE8P0CG41 777 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 ZNF12P17014 697 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 GOT1P17174 413 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 ARF4P18085 180 aaPredicted RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 ELAVL4P26378 380 aaKnown RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 ALDH1B1P30837 517 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 DUTP33316 252 aaKnown RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 CNN1P51911 297 aaKnown RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 SEC61A1P61619 476 aaKnown RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 EEF1A1P68104 462 aaKnown RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 FKBP1BP68106 108 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 KCNJ10P78508 379 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 LCP2Q13094 533 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 CEBPEQ15744 281 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 PHKG1Q16816 387 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 ANKDD1AQ495B1 522 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 HSP90AA5PQ58FG0 334 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 EEF1A1P5Q5VTE0 462 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 KLHL10Q6JEL2 608 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 TTC27Q6P3X3 843 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 B3GLCTQ6Y288 498 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 RTN4RL2Q86UN3 420 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 CTAGE4Q8IX94 777 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 NOA1Q8NC60 698 aaKnown RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 CCDC110Q8TBZ0 833 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 GRHL3Q8TE85 626 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 TSACCQ96A04 125 aaPredicted RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 RFT1Q96AA3 541 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 BICD1Q96G01 975 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 TSSK2Q96PF2 358 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 MIS12Q9H081 205 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 DPH5Q9H2P9 285 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 RWDD1Q9H446 243 aaPredicted RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 LRRC4Q9HBW1 653 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 GPN1Q9HCN4 374 aaPredicted RBP6.15□□□□□ -1.42
SMC5-202ENST00000471372 POLE3Q9NRF9 147 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 SLC38A7Q9NVC3 462 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 SPHK1Q9NYA1 384 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 WNT16Q9UBV4 365 aa6.15□□□□□ -1.42
SMC5-202ENST00000471372 PFASO15067 1338 aa6.15□□□□□ -1.43
SMC5-202ENST00000471372 TMEM129A0AVI4 362 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 MACROD2A1Z1Q3 448 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 C4orf47A7E2U8 309 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 MAGEB2O15479 319 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 NOL3O60936 208 aaKnown RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 OR6B1O95007 311 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 GLUD1P00367 558 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 FSHBP01225 129 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 NUDT17P0C025 328 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 GLUD2P49448 558 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 PEX5P50542 639 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 KLC1Q07866 573 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 DLG1Q12959 904 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 PPP1R8Q12972 351 aaKnown RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 ABRQ12979 859 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 TSTA3Q13630 321 aaPredicted RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 GK2Q14410 553 aaPredicted RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 HLFQ16534 295 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 PRAMEF7Q5VXH5 474 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 MEX3BQ6ZN04 569 aaKnown RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 GPR141Q7Z602 305 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms