RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 OR9I1Q8NGQ6 314 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 CDRT15Q96T59 188 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 APOOQ9BUR5 198 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 LRTM1Q9HBL6 345 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 C1orf109Q9NX04 203 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 SLC23A2Q9UGH3 650 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 BCAP29Q9UHQ4 241 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 PNMA8BQ9ULN7 279 aaPredicted RBP16.89■□□□□ 0.29
HSPG2-208ENST00000471322 ASF1AQ9Y294 204 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 WDFY3Q8IZQ1 3526 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 ANKRD12Q6UB98 2062 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 ASPMQ8IZT6 3477 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 NPIPB8E9PQR5 432 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 NR5A2O00482 541 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 FBP2O00757 339 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 SH3BP5O60239 455 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 RSL1D1O76021 490 aaKnown RBP16.88■□□□□ 0.29
HSPG2-208ENST00000471322 CD59P13987 128 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 PRPH2P23942 346 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 ID4P47928 161 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 PNLIPRP1P54315 467 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 ZNF423Q2M1K9 1284 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 SGO1Q5FBB7 561 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 XKR6Q5GH73 641 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 C10orf62Q5T681 223 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-208ENST00000471322 CACHD1Q5VU97 1274 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 FRG2Q64ET8 278 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 PRMT9Q6P2P2 845 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 SYTL1Q8IYJ3 562 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 ENDOVQ8N8Q3 282 aaKnown RBP16.88■□□□□ 0.29
HSPG2-208ENST00000471322 SETD7Q8WTS6 366 aaKnown RBP16.88■□□□□ 0.29
HSPG2-208ENST00000471322 ZNF480Q8WV37 535 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 WDR60Q8WVS4 1066 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 TFGQ92734 400 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-208ENST00000471322 FRG2BQ96QU4 278 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 HOPXQ9BPY8 73 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-208ENST00000471322 GID8Q9NWU2 228 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 KLF15Q9UIH9 416 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 CROTQ9UKG9 612 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 PRKAB1Q9Y478 270 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 TDRD6O60522 2096 aaKnown RBP16.88■□□□□ 0.29
HSPG2-208ENST00000471322 SPTY2D1-AS1A0A0U1RR47 76 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 A0A1B0GTQ1 180 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 A0A1W2PP18 115 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 ZNF839A8K0R7 811 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 CFLARO15519 480 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 SLC35G4P0C7Q5 338 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 ARRB1P49407 418 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-208ENST00000471322 CCT8P50990 548 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 POLR2JP52435 117 aaKnown RBP16.88■□□□□ 0.29
HSPG2-208ENST00000471322 NME5P56597 212 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 PSME3P61289 254 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 PRKG2Q13237 762 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 RCAN2Q14206 197 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 ARHGAP19Q14CB8 494 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 IL23RQ5VWK5 629 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 GRHL2Q6ISB3 625 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 RIPOR1Q6ZS17 1223 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 ZFAND4Q86XD8 727 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 JADE3Q92613 823 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 SPDL1Q96EA4 605 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 C1orf50Q9BV19 199 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 SGPP1Q9BX95 441 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 FARSBQ9NSD9 589 aaKnown RBP16.88■□□□□ 0.29
HSPG2-208ENST00000471322 DLL3Q9NYJ7 618 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 BTBD3Q9Y2F9 522 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 TMED5Q9Y3A6 229 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 DYRK1BQ9Y463 629 aa16.88■□□□□ 0.29
HSPG2-208ENST00000471322 H0YIV9 168 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 TM4SF5O14894 197 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 SEC22BO75396 215 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 PDYNP01213 254 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 CEACAM5P06731 702 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 HSD3B1P14060 373 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 HSD3B2P26439 372 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 MAPK1P28482 360 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 KIAA1024LP59773 190 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 RFTN2Q52LD8 501 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-208ENST00000471322 PIGGQ5H8A4 983 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 CYP20A1Q6UW02 462 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 ENPP7Q6UWV6 458 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 RD3Q7Z3Z2 195 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 DEFB124Q8NES8 71 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 TSACCQ96A04 125 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-208ENST00000471322 REPS1Q96D71 796 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 CMTM7Q96FZ5 175 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 SCARF2Q96GP6 870 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-208ENST00000471322 METTL2AQ96IZ6 378 aaKnown RBP16.87■□□□□ 0.29
HSPG2-208ENST00000471322 HBEGFQ99075 208 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 ZBTB18Q99592 522 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 TRIT1Q9H3H1 467 aaKnown RBP16.87■□□□□ 0.29
HSPG2-208ENST00000471322 TCEAL2Q9H3H9 227 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-208ENST00000471322 GPR27Q9NS67 375 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 UCKL1Q9NWZ5 548 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 PCDHGA11Q9Y5H2 935 aa16.87■□□□□ 0.29
HSPG2-208ENST00000471322 PCYT1BQ9Y5K3 369 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-208ENST00000471322 KRT87PA6NCN2 255 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 NPPAP01160 153 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 G6PDP11413 515 aa16.86■□□□□ 0.29
HSPG2-208ENST00000471322 ACPPP15309 386 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms