RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 INSL5Q9Y5Q6 135 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 SCN5AQ14524 2016 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 DENND4CQ5VZ89 1909 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 MAGEB17A8MXT2 336 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 CD22P20273 847 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 CYP2A7P20853 494 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 SPINT3P49223 89 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 EPHB3P54753 998 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 HSPA14Q0VDF9 509 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 SFSWAPQ12872 951 aaKnown RBP13.22□□□□□ -0.29
BRCA1-209ENST00000470026 CLCA4Q14CN2 919 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 LAPTM4AQ15012 233 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 KIAA1614Q5VZ46 1190 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 PRSS48Q7RTY5 328 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 CAMKMTQ7Z624 323 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 BTLAQ7Z6A9 289 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 SLCO6A1Q86UG4 719 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 SVOPQ8N4V2 548 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 TMCO5AQ8N6Q1 288 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 PAF1Q8N7H5 531 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 KLHL23Q8NBE8 558 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 PHF10Q8WUB8 498 aaKnown RBP13.22□□□□□ -0.29
BRCA1-209ENST00000470026 PYCR2Q96C36 320 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 ITPKCQ96DU7 683 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 C7orf34Q96L11 122 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 PANX1Q96RD7 426 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 HERC2P3Q9BVR0 1158 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 ACOT13Q9NPJ3 140 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 PDP1Q9P0J1 537 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-209ENST00000470026 LSM7Q9UK45 103 aaKnown RBP13.22□□□□□ -0.29
BRCA1-209ENST00000470026 PMF1-BGLAPU3KQ54 211 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 YY2O15391 372 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 MT-ND2P03891 347 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 ABCB1P08183 1280 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-209ENST00000470026 ATP1B2P14415 290 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-209ENST00000470026 MAP2K4P45985 399 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 CRYBA2P53672 197 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 SLC7A9P82251 487 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 SEMG2Q02383 582 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 FADDQ13158 208 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 CHIT1Q13231 466 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 PROX2Q3B8N5 592 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 VTCN1Q7Z7D3 282 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 P2RY8Q86VZ1 359 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 SYT12Q8IV01 421 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 BBS7Q8IWZ6 715 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 MINDY2Q8NBR6 621 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-209ENST00000470026 HSH2DQ96JZ2 352 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 FAM83CQ9BQN1 747 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 PCDHB11Q9Y5F2 797 aa13.22□□□□□ -0.29
BRCA1-209ENST00000470026 hCG_2039718K7EN88 272 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 PRRG1O14668 218 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 KPNA5O15131 536 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 RGS10O43665 173 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 SGTAO43765 313 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 WBP4O75554 376 aaKnown RBP13.21□□□□□ -0.29
BRCA1-209ENST00000470026 FKBP9O95302 570 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 CYP4B1P13584 511 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 CDH3P22223 829 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 GRK3P35626 688 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 PXNP49023 591 aaPredicted RBP13.21□□□□□ -0.29
BRCA1-209ENST00000470026 CCR3P51677 355 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 CYP2A13Q16696 494 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 C22orf39Q6P5X5 142 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 OR6Q1Q8NGQ2 317 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 NDNFQ8TB73 568 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 STARD8Q92502 1023 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 EPYCQ99645 322 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 GABARAPL3Q9BY60 117 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 SIRT5Q9NXA8 310 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 SELENONQ9NZV5 590 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 BTNL2Q9UIR0 455 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 MAFFQ9ULX9 164 aa13.21□□□□□ -0.29
BRCA1-209ENST00000470026 RUVBL1Q9Y265 456 aaKnown RBP13.21□□□□□ -0.29
BRCA1-209ENST00000470026 SAMHD1Q9Y3Z3 626 aaKnown RBP13.21□□□□□ -0.29
BRCA1-209ENST00000470026 C1orf226A1L170 272 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 TMEM229AB2RXF0 380 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 SLCO2B1O94956 709 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 HSD3B1P14060 373 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 HSD3B2P26439 372 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 EPHA2P29317 976 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 HPCAL1P37235 193 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 HALP42357 657 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 CTSOP43234 321 aaPredicted RBP13.21□□□□□ -0.3
BRCA1-209ENST00000470026 CSNK2BP67870 215 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 KCNJ10P78508 379 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 CBX3Q13185 183 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 DGUOKQ16854 277 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 UBE2UQ5VVX9 321 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 HORMAD1Q86X24 394 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 ZFP90Q8TF47 636 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 APH1BQ8WW43 257 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 HRASLS5Q96KN8 279 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 EBPLQ9BY08 206 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 ABCG8Q9H221 673 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 THUMPD1Q9NXG2 353 aaKnown RBP13.21□□□□□ -0.3
BRCA1-209ENST00000470026 VPS29Q9UBQ0 182 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 AASSQ9UDR5 926 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms