RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CCDC6Q16204 474 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 ZNF284Q2VY69 593 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 RNASE12Q5GAN4 147 aaKnown RBP6.16□□□□□ -1.42
PTCD3-208ENST00000469585 PCID2Q5JVF3 399 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 ZNF362Q5T0B9 420 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-208ENST00000469585 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 ZDHHC20Q5W0Z9 365 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 FAM90A2PQ658T7 463 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 DENND2CQ68D51 928 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 TXNRD3NBQ6F5E7 133 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 MFSD7Q6UXD7 560 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 C4orf22Q6V702 233 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 BBS12Q6ZW61 710 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 DGLUCYQ7Z3D6 616 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 CAMK1DQ8IU85 385 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 ARHGAP12Q8IWW6 846 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 MINDY1Q8N5J2 469 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 PLD5Q8N7P1 536 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 SETD7Q8WTS6 366 aaKnown RBP6.16□□□□□ -1.42
PTCD3-208ENST00000469585 HTR3CQ8WXA8 447 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 DNASE2BQ8WZ79 361 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 FAF2Q96CS3 445 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 AGAP3Q96P47 875 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 AGAP2Q99490 1192 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 WRAP53Q9BUR4 548 aaKnown RBP6.16□□□□□ -1.42
PTCD3-208ENST00000469585 HEMGNQ9BXL5 484 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 GAREM1Q9H706 876 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 PCDH9Q9HC56 1237 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 TM9SF3Q9HD45 589 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 PKD2L2Q9NZM6 624 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 NCKIPSDQ9NZQ3 722 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 SLC17A6Q9P2U8 582 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 MGAT4CQ9UBM8 478 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 FAM153AQ9UHL3 310 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 RSPH14Q9UHP6 348 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 NEU3Q9UQ49 428 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 ZNF148Q9UQR1 794 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 PPP2R2CQ9Y2T4 447 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 PKP3Q9Y446 797 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 JRKLQ9Y4A0 524 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.16□□□□□ -1.42
PTCD3-208ENST00000469585 RALGAPA1Q6GYQ0 2036 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 hCG_1818297A0A087WSY0 165 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 IGLON5A6NGN9 336 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 C3orf70A6NLC5 250 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 C4orf47A7E2U8 309 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 KCNK1O00180 336 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 AP3B1O00203 1094 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 TLR4O00206 839 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 PSMD11O00231 422 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 RNF103O00237 685 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 KCNN4O15554 427 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 FLRT2O43155 660 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 DNPH1O43598 174 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 AKAP8O43823 692 aaKnown RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 CTSLP07711 333 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 THEGLP0DJG4 465 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 ADRA1DP25100 572 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 STIP1P31948 543 aaKnown RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 DRD3P35462 400 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 CD86P42081 329 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 PAFAH1B1P43034 410 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 PPM1FP49593 454 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 CSNK1EP49674 416 aaKnown RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 DGKQP52824 942 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 MAXP61244 160 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 HNRNPKP61978 463 aaKnown RBP eCLIP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 YPEL5P62699 121 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 CYP4F2P78329 520 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 IRX4P78413 519 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 IFI35P80217 286 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 SARNPP82979 210 aaKnown RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 GBE1Q04446 702 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 GRIK2Q13002 908 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 SF3A2Q15428 464 aaKnown RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 ERCC6LQ2NKX8 1250 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 TEX44Q53QW1 395 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 TSTD2Q5T7W7 516 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 PIP5KL1Q5T9C9 394 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 STPG1Q5TH74 334 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 CYP4V2Q6ZWL3 525 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 LINC00523Q86TU6 105 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 DCLK2Q8N568 766 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 PNPLA1Q8N8W4 532 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 LPCAT1Q8NF37 534 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 GRK7Q8WTQ7 553 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 ASB12Q8WXK4 309 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 RSC1A1Q92681 617 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 ARRDC3Q96B67 414 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 NUS1Q96E22 293 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 P2RY11Q96G91 374 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 VPS50Q96JG6 964 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 TTC25Q96NG3 672 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 LGMNQ99538 433 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 MLPHQ9BV36 600 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-208ENST00000469585 DUSP26Q9BV47 211 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 TMEM120AQ9BXJ8 343 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 GPR63Q9BZJ6 419 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 SLC25A51Q9H1U9 297 aa6.15□□□□□ -1.42
PTCD3-208ENST00000469585 CARD9Q9H257 536 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms