RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 BOLA3Q53S33 107 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 ZNF766Q5HY98 468 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 LDLRAP1Q5SW96 308 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 CCDC122Q5T0U0 273 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 SPINK14Q6IE38 97 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 KDELC1Q6UW63 502 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 CLEC9AQ6UXN8 241 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 ZNF571Q7Z3V5 609 aaPredicted RBP5.01□□□□□ -1.61
PTPN4-209ENST00000469511 BIVMQ86UB2 503 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 BEST3Q8N1M1 668 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 CCNYQ8ND76 341 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 LRRN4CLQ8ND94 238 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 CCDC110Q8TBZ0 833 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 FAM71BQ8TC56 605 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 THAP3Q8WTV1 239 aaPredicted RBP5.01□□□□□ -1.61
PTPN4-209ENST00000469511 HDAC10Q969S8 669 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 FKBP10Q96AY3 582 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 MAGED4Q96JG8 741 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 C17orf62Q9BQA9 187 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 GPATCH1Q9BRR8 931 aaKnown RBP5.01□□□□□ -1.61
PTPN4-209ENST00000469511 ADGRE3Q9BY15 652 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 TFB2MQ9H5Q4 396 aaKnown RBP5.01□□□□□ -1.61
PTPN4-209ENST00000469511 WDR54Q9H977 334 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 COG4Q9H9E3 785 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 CUTCQ9NTM9 273 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 STMN3Q9NZ72 180 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 AMACRQ9UHK6 382 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 ACSL5Q9ULC5 683 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 PLCL2Q9UPR0 1127 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 TMA7Q9Y2S6 64 aaKnown RBP5.01□□□□□ -1.61
PTPN4-209ENST00000469511 HIVEP2P31629 2446 aa5.01□□□□□ -1.61
PTPN4-209ENST00000469511 LOC105369274A0A096LPK9 316 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 IGHV1-45A0A0A0MS14 117 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 NSG1A0A0A6YYJ2 146 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 LOC102723532A0A0G2JNH3 316 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 A0A0J9YY10 115 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 LOC285095A0A1B0GVY8 99 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 ANKRD34BA5PLL1 514 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 KRT87PA6NCN2 255 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 ASPDHA6ND91 283 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 A8MUI8 341 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 ISM1B1AKI9 464 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 E9PLN8 166 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 MAP2K7O14733 419 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 SHOXO15266 292 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 CBFA2T2O43439 604 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 CTSVO60911 334 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 USP1O94782 785 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 BMP10O95393 424 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 PROCP04070 461 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 SERPINA7P05543 415 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 CD63P08962 238 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 HOXD4P09016 255 aaPredicted RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 INHBBP09529 407 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 ATP1A3P13637 1013 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 ABOP16442 354 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 HMGCLP35914 325 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 CD96P40200 585 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 PRKCIP41743 596 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 NSG1P42857 185 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 ZNF135P52742 658 aaPredicted RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 WNT3AP56704 352 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 IFI35P80217 286 aaPredicted RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 XIAPP98170 497 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 ALDH6A1Q02252 535 aaKnown RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 FOLH1Q04609 750 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 PPIDQ08752 370 aaKnown RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 MYBPHQ13203 477 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 BRD3Q15059 726 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 PCOLCEQ15113 449 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 BCL7AQ4VC05 210 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 SIRPB2Q5JXA9 342 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 SFRP5Q5T4F7 317 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 CCDC183Q5T5S1 534 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 FRMPD2BQ6IN97 320 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 TIGD7Q6NT04 549 aaPredicted RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 NDUFAF7Q7L592 441 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 GALNTL5Q7Z4T8 443 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 PNPLA5Q7Z6Z6 429 aaPredicted RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 TAX1BP1Q86VP1 789 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 LRRC49Q8IUZ0 686 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 LIX1LQ8IVB5 337 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 ZZZ3Q8IYH5 903 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 OR4N4Q8N0Y3 316 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 CPSF7Q8N684 471 aaKnown RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 CLDN19Q8N6F1 224 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 PLD5Q8N7P1 536 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 LINC01555Q8NAE3 123 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 MLKLQ8NB16 471 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 MDS2Q8NDY4 140 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 LILRB4Q8NHJ6 448 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 HM13Q8TCT9 377 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 BLOC1S5Q8TDH9 187 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 PHF10Q8WUB8 498 aaKnown RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 TEKT4Q8WW24 435 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 TFGQ92734 400 aaPredicted RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 FATE1Q969F0 183 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 NACC2Q96BF6 587 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 MIEF2Q96C03 454 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 OXNAD1Q96HP4 312 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms