RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CDKL1Q00532 357 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 SLC9A5Q14940 896 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 HKDC1Q2TB90 917 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 TAF1BQ53T94 588 aaPredicted RBP11.16□□□□□ -0.62
CUX1-207ENST00000465461 FAM69BQ5VUD6 431 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 CCDC81Q6ZN84 652 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 RNF44Q7L0R7 432 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 C17orf64Q86WR6 236 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 TMEM151BQ8IW70 566 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 METTL27Q8N6F8 245 aaPredicted RBP11.16□□□□□ -0.62
CUX1-207ENST00000465461 STAG3L4Q8TBR4 150 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 EPS8L3Q8TE67 593 aaKnown RBP11.16□□□□□ -0.62
CUX1-207ENST00000465461 AENQ8WTP8 325 aaKnown RBP11.16□□□□□ -0.62
CUX1-207ENST00000465461 ATL1Q8WXF7 558 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 NEIL2Q969S2 332 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 ZBTB9Q96C00 473 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 GPR78Q96P69 363 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 OR2A5Q96R48 311 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 ATOH8Q96SQ7 321 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 ZFYVE21Q9BQ24 234 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 CHST8Q9H2A9 424 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 SPNS1Q9H2V7 528 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 GPN2Q9H9Y4 310 aaPredicted RBP11.16□□□□□ -0.62
CUX1-207ENST00000465461 WWOXQ9NZC7 414 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 PADI1Q9ULC6 663 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 SNX7Q9UNH6 387 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 PCDHB3Q9Y5E6 796 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 KLK4Q9Y5K2 254 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 HEATR5BQ9P2D3 2071 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 A0A1W2PPM1 405 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 MEN1O00255 615 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 NKX2-8O15522 239 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 P2RX6O15547 441 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 RFPL1O75677 317 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 KLHL2O95198 593 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 SNRPAP09012 282 aaKnown RBP11.15□□□□□ -0.62
CUX1-207ENST00000465461 CCND1P24385 295 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 VARSP26640 1264 aaKnown RBP11.15□□□□□ -0.62
CUX1-207ENST00000465461 BCL6P41182 706 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 SLC6A12P48065 614 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 RPS18P62269 152 aaKnown RBP11.15□□□□□ -0.62
CUX1-207ENST00000465461 NFKB2Q00653 900 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 ABHD18Q0P651 414 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 MAP7Q14244 749 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 ATP1A1-AS1Q5TC04 95 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 WDR93Q6P2C0 686 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 TLDC1Q6P9B6 456 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 TTLL10Q6ZVT0 673 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 TAOK1Q7L7X3 1001 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 DSELQ8IZU8 1212 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 CYP4X1Q8N118 509 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 ZNF740Q8NDX6 193 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.15□□□□□ -0.62
CUX1-207ENST00000465461 SLC5A11Q8WWX8 675 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 ISL2Q96A47 359 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 SCYL1Q96KG9 808 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 HAUS8Q9BT25 410 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 NDC1Q9BTX1 674 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 PCBD2Q9H0N5 130 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 TMEM184CQ9NVA4 438 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 ANKMY1Q9P2S6 941 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 NDOR1Q9UHB4 597 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 RALYQ9UKM9 306 aaKnown RBP11.15□□□□□ -0.62
CUX1-207ENST00000465461 DYRK1BQ9Y463 629 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 AHCTF1Q8WYP5 2266 aa11.15□□□□□ -0.62
CUX1-207ENST00000465461 DMXL2Q8TDJ6 3036 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 HYKKA2RU49 373 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 LRRC14BA6NHZ5 514 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 HAX1O00165 279 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 TERTO14746 1132 aaKnown RBP11.14□□□□□ -0.63
CUX1-207ENST00000465461 CCNT2O60583 730 aaKnown RBP11.14□□□□□ -0.63
CUX1-207ENST00000465461 SRPX2O60687 465 aaPredicted RBP11.14□□□□□ -0.63
CUX1-207ENST00000465461 KERAO60938 352 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 MT-ND3P03897 115 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 S100BP04271 92 aaPredicted RBP11.14□□□□□ -0.63
CUX1-207ENST00000465461 KLK3P07288 261 aaPredicted RBP11.14□□□□□ -0.63
CUX1-207ENST00000465461 MTHFD2P13995 350 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 CNTFP26441 200 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 SLC26A3P40879 764 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 GCGRP47871 477 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 HNMTP50135 292 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 TMPRSS3P57727 454 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 VAC14Q08AM6 782 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 DNASE1L3Q13609 305 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 ACAP2Q15057 778 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 FAM83EQ2M2I3 478 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 TECRLQ5HYJ1 363 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 LGSNQ5TDP6 509 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 ZNF385CQ66K41 422 aaPredicted RBP11.14□□□□□ -0.63
CUX1-207ENST00000465461 SULT1C3Q6IMI6 304 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 C16orf46Q6P387 395 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 TMPRSS11BQ86T26 416 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 SHISA5Q8N114 240 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 CSNK1A1LQ8N752 337 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 SNX31Q8N9S9 440 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 PDPRQ8NCN5 879 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 MZB1Q8WU39 189 aa11.14□□□□□ -0.63
CUX1-207ENST00000465461 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms