RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 MRPL46Q9H2W6 279 aaKnown RBP11.38□□□□□ -0.59
APTX-213ENST00000465003 FBXO8Q9NRD0 319 aa11.38□□□□□ -0.59
APTX-213ENST00000465003 THSD1Q9NS62 852 aa11.38□□□□□ -0.59
APTX-213ENST00000465003 MAP1BP46821 2468 aaKnown RBP11.38□□□□□ -0.59
APTX-213ENST00000465003 MGAQ8IWI9 3026 aa11.38□□□□□ -0.59
APTX-213ENST00000465003 A8MT66 165 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 P2RX6O15547 441 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 SCRG1O75711 98 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 STK16O75716 305 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 OR2B3O76000 313 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 STK17BO94768 372 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 MED26O95402 600 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 EEF1DP29692 281 aaKnown RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 BCL6P41182 706 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 HNMTP50135 292 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 CYP4F2P78329 520 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 ACY1Q03154 408 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 TSNAXIP1Q2TAA8 658 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 C1orf189Q5VU69 101 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 FAM199XQ6PEV8 388 aaPredicted RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 LCTLQ6UWM7 567 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 TIPARPQ7Z3E1 657 aaKnown RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 VASH2Q86V25 355 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 MCATQ8IVS2 390 aaKnown RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 GALNT6Q8NCL4 622 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 SLC5A11Q8WWX8 675 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 ZCCHC14Q8WYQ9 949 aaKnown RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 CABS1Q96KC9 395 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 CDK15Q96Q40 435 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 CD244Q9BZW8 370 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 SLC17A7Q9P2U7 560 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 LGALS13Q9UHV8 139 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 ACACBO00763 2458 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 SCN3AQ9NY46 2000 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 A0A1B0GTL3 188 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 SYCE1LA8MT33 242 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 H3BMH7 237 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 PPP6CO00743 305 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 COPEO14579 308 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 RGS16O15492 202 aaPredicted RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 ZNF749O43361 778 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 CAPNS1P04632 268 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 RBP1P09455 135 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 H2AFXP16104 143 aaPredicted RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 CD22P20273 847 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 CDH13P55290 713 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 CBX1P83916 185 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 CDC16Q13042 620 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 SETDB1Q15047 1291 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 PDK4Q16654 411 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 TMEM164Q5U3C3 297 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 LCN10Q6JVE6 187 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 CEACAM20Q6UY09 585 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 MYLK4Q86YV6 388 aaPredicted RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 TMEM151BQ8IW70 566 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 TEX9Q8N6V9 391 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 CCDC63Q8NA47 563 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 RUFY1Q96T51 708 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 ZFYVE21Q9BQ24 234 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 MRPL57Q9BQC6 102 aaKnown RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 SELENOSQ9BQE4 189 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 ROPN1BQ9BZX4 212 aaPredicted RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 PPCSQ9HAB8 311 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 ROPN1Q9HAT0 212 aaPredicted RBP11.37□□□□□ -0.59
APTX-213ENST00000465003 PILRAQ9UKJ1 303 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 DYRK1BQ9Y463 629 aa11.37□□□□□ -0.59
APTX-213ENST00000465003 TARM1B6A8C7 271 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 H0YGG7 62 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 NVLO15381 856 aaKnown RBP11.36□□□□□ -0.59
APTX-213ENST00000465003 MAP3K7O43318 606 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 DLX3O60479 287 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 SH3BGRLO75368 114 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 DXOO77932 396 aaKnown RBP11.36□□□□□ -0.59
APTX-213ENST00000465003 SERPIND1P05546 499 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 FGF5P12034 268 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 COL6A2P12110 1019 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 CCND1P24385 295 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 ARL1P40616 181 aaPredicted RBP11.36□□□□□ -0.59
APTX-213ENST00000465003 CCR10P46092 362 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 ALDH18A1P54886 795 aaKnown RBP11.36□□□□□ -0.59
APTX-213ENST00000465003 ITGA1P56199 1179 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 RAB15P59190 212 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 ARF3P61204 181 aaPredicted RBP11.36□□□□□ -0.59
APTX-213ENST00000465003 WASHC2DQ5SRD0 308 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 RNF44Q7L0R7 432 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 ZNF771Q7L3S4 317 aaPredicted RBP11.36□□□□□ -0.59
APTX-213ENST00000465003 CCDC91Q7Z6B0 441 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 RNF175Q8N4F7 328 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 ACMSDQ8TDX5 336 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 ZUFSPQ96AP4 578 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 TMEM237Q96Q45 408 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 HAUS8Q9BT25 410 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 DDA1Q9BW61 102 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 FANCEQ9HB96 536 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 DNAJC11Q9NVH1 559 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 OPTCQ9UBM4 332 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 PLCL2Q9UPR0 1127 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 KCNE2Q9Y6J6 123 aa11.36□□□□□ -0.59
APTX-213ENST00000465003 URB1O60287 2271 aaKnown RBP11.36□□□□□ -0.59
APTX-213ENST00000465003 DSPP15924 2871 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms