RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	SLC25A47	Q6Q0C1	308 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	PET117	Q6UWS5	81 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	G2E3	Q7L622	706 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	PTAR1	Q7Z6K3	402 aa	Predicted RBP	3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	TICAM2	Q86XR7	235 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	MARVELD2	Q8N4S9	558 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	NIPA2	Q8N8Q9	360 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	SLC37A3	Q8NCC5	494 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	ZNF248	Q8NDW4	579 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	GPRC5A	Q8NFJ5	357 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	DBF4B	Q8NFT6	615 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	OR7A2P	Q8NGA2	310 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	OR5AP2	Q8NGF4	316 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	SMAP2	Q8WU79	429 aa	Predicted RBP	3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	DEPDC1B	Q8WUY9	529 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	APOBEC4	Q8WW27	367 aa	Known RBP	3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	PIK3R3	Q92569	461 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	RAD54L	Q92698	747 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	MR1	Q95460	341 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	AZIN2	Q96A70	460 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	GMPPA	Q96IJ6	420 aa	Predicted RBP	3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	SPATA17	Q96L03	361 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	NECTIN4	Q96NY8	510 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	KLHL5	Q96PQ7	755 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	INPP5K	Q9BT40	448 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	RIMS4	Q9H426	269 aa	Predicted RBP	3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	FGF22	Q9HCT0	170 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	C19orf25	Q9UFG5	118 aa	Predicted RBP	3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	WDR37	Q9Y2I8	494 aa		3.57	□□□□□ -1.84
PTPN12-210	ENST00000464313	MEIOC	A2RUB1	952 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	C17orf105	B2RV13	164 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313		F8VVB4	439 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313		F8VWA3	439 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313		O00370	1275 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	PSMD14	O00487	310 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	EXTL3	O43909	919 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	FCGR3B	O75015	233 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	LUC7L3	O95232	432 aa	Known RBP	3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	PGLS	O95336	258 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	SLC2A2	P11168	524 aa	Predicted RBP	3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	GP1BB	P13224	206 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	F3	P13726	295 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	EPOR	P19235	508 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	LEPR	P48357	1165 aa	Known RBP	3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	NAGLU	P54802	743 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	TUBB2A	Q13885	445 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	SCARB2	Q14108	478 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	TEAD2	Q15562	447 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	PDLIM3	Q53GG5	364 aa	Predicted RBP	3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	TXNRD3NB	Q6F5E7	133 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	OR4C11	Q6IEV9	310 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	FAM166A	Q6J272	317 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	CYB5D1	Q6P9G0	228 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	BTNL8	Q6UX41	500 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	ANKRD33	Q7Z3H0	272 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	KRT77	Q7Z794	578 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	AMIGO1	Q86WK6	493 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	HOGA1	Q86XE5	327 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	OR8H3	Q8N146	312 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	RAB42	Q8N4Z0	105 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	ADAD2	Q8NCV1	583 aa	Known RBP	3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	C9orf43	Q8TAL5	461 aa	Predicted RBP	3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	SEPT1	Q8WYJ6	367 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	P2RX5	Q93086	422 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	ZNF486	Q96H40	463 aa	Predicted RBP	3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	MAGED4	Q96JG8	741 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	ART5	Q96L15	291 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	CITED2	Q99967	270 aa	Predicted RBP	3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	ADPGK	Q9BRR6	497 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	PI4K2A	Q9BTU6	479 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	FUCA2	Q9BTY2	467 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	TUBB2B	Q9BVA1	445 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	BARHL1	Q9BZE3	327 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	P2RY12	Q9H244	342 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	ACTL8	Q9H568	366 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	GRPEL1	Q9HAV7	217 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	MAN2C1	Q9NTJ4	1040 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313	DNAJB9	Q9UBS3	223 aa		3.56	□□□□□ -1.84
PTPN12-210	ENST00000464313		A0A1W2PR80	420 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	C2CD4D	B7Z1M9	353 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	PRSS46	E5RG02	174 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	IGLV1-44	P01699	117 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	VIM	P08670	466 aa	Known RBP	3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	CEBPB	P17676	345 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	DUT	P33316	252 aa	Known RBP	3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	OPRL1	P41146	370 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	KCNJ1	P48048	391 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	SLC6A12	P48065	614 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	PTK6	Q13882	451 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	OPCML	Q14982	345 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	RBBP7	Q16576	425 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	ZNF74	Q16587	644 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	MRGPRG-AS1	Q2M3A8	158 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	FAM174B	Q3ZCQ3	159 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	ZRANB3	Q5FWF4	1079 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	ADAM5	Q6NVV9	412 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	CROCCP3	Q8IVE0	287 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	SIX6OS1	Q8N1H7	587 aa		3.55	□□□□□ -1.84
PTPN12-210	ENST00000464313	CCDC63	Q8NA47	563 aa		3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms