RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ATXN1LP0C7T5 689 aaKnown RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 PIPP12273 146 aaPredicted RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 LPOP22079 712 aaPredicted RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 DGKAP23743 735 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 PRPH2P23942 346 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 CXCR2P25025 360 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 HLA-DMAP28067 261 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 NOS3P29474 1203 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 HLA-FP30511 346 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 FMO4P31512 558 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 GGT2P36268 569 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 BMPR1AP36894 532 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 NR4A2P43354 598 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 MASP1P48740 699 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 CLK3P49761 638 aaKnown RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 RORCP51449 518 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 RPL38P63173 70 aaKnown RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 RPP38P78345 283 aaKnown RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 PIGFQ07326 219 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 CD300CQ08708 224 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 ASAH1Q13510 395 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 SERINC3Q13530 473 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 EIF4EBP2Q13542 120 aaPredicted RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 GPR50Q13585 617 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 C1DQ13901 141 aaKnown RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 SIM2Q14190 667 aaPredicted RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 KIAA0040Q15053 153 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 NFE2Q16621 373 aaPredicted RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 FAM174BQ3ZCQ3 159 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 HABP4Q5JVS0 413 aaKnown RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 C10orf62Q5T681 223 aaPredicted RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 MEDAGQ5VYS4 303 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 LRRC66Q68CR7 880 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 SIGIRRQ6IA17 410 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 LAIR2Q6ISS4 152 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 ZNF280DQ6N043 979 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 CES5AQ6NT32 575 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 TMPRSS11AQ6ZMR5 421 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 GCNT7Q6ZNI0 430 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 Q6ZSR9 355 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 EIF3MQ7L2H7 374 aaKnown RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 ARMCX6Q7L4S7 300 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 GDPD3Q7L5L3 318 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 CCDC190Q86UF4 302 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 NOXA1Q86UR1 476 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 SLC30A8Q8IWU4 369 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 CHPFQ8IZ52 775 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 ABI1Q8IZP0 508 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 TCTE3Q8IZS6 198 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 OR8H2Q8N162 312 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 CPA6Q8N4T0 437 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 EFHBQ8N7U6 833 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 SPERTQ8NA61 448 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 ARRDC4Q8NCT1 418 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 VPS37AQ8NEZ2 397 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 ZNF675Q8TD23 568 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 CSGALNACT1Q8TDX6 532 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 FRS2Q8WU20 508 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 UBTD2Q8WUN7 234 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 JPH3Q8WXH2 748 aaPredicted RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 MYLPFQ96A32 169 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 TESCQ96BS2 214 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 C8orf48Q96LL4 319 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 TEX37Q96LM6 180 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 TRNT1Q96Q11 434 aaKnown RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 SIGLEC11Q96RL6 698 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 GPR21Q99679 349 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 SEMA3CQ99985 751 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 MAPKAP1Q9BPZ7 522 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 TMEM246Q9BRR3 403 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 C16orf70Q9BSU1 422 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 FAM126AQ9BYI3 521 aaPredicted RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 CLPBQ9H078 707 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 ATXN3LQ9H3M9 355 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 POLE4Q9NR33 117 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 TRMT13Q9NUP7 481 aaKnown RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 GIMAP4Q9NUV9 329 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 IL37Q9NZH6 218 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 VAPAQ9P0L0 249 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 MARCH4Q9P2E8 410 aaPredicted RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 KLHL42Q9P2K6 505 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 GALPQ9UBC7 116 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 UBA2Q9UBT2 640 aaPredicted RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 GIMAP2Q9UG22 337 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 EIF2B4Q9UI10 523 aaKnown RBP6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 SNX6Q9UNH7 406 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 NEU3Q9UQ49 428 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 PCDHGA3Q9Y5H0 932 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 PTGDR2Q9Y5Y4 395 aa6.98□□□□□ -1.29
CLSTN1-204ENST00000464286 A0A0G2JLL6 359 aaPredicted RBP6.97□□□□□ -1.29
CLSTN1-204ENST00000464286 KRT87PA6NCN2 255 aa6.97□□□□□ -1.29
CLSTN1-204ENST00000464286 C9JVG2 144 aa6.97□□□□□ -1.29
CLSTN1-204ENST00000464286 NPIPB8E9PQR5 432 aa6.97□□□□□ -1.29
CLSTN1-204ENST00000464286 I6L893 689 aaPredicted RBP6.97□□□□□ -1.29
CLSTN1-204ENST00000464286 EIF3FO00303 357 aaPredicted RBP6.97□□□□□ -1.29
CLSTN1-204ENST00000464286 RFXANKO14593 260 aa6.97□□□□□ -1.29
CLSTN1-204ENST00000464286 NDUFB5O43674 189 aa6.97□□□□□ -1.29
CLSTN1-204ENST00000464286 PRAMEF11O60813 436 aa6.97□□□□□ -1.29
CLSTN1-204ENST00000464286 AOC2O75106 756 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms