RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 LRRC14BA6NHZ5 514 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 TK2O00142 265 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 PRAMEF4O60810 478 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 S100BP04271 92 aaPredicted RBP18.14■□□□□ 0.49
LMNB1-204ENST00000463908 GSTA1P08263 222 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 EPORP19235 508 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 HRH2P25021 359 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 COL9A2Q14055 689 aaPredicted RBP18.14■□□□□ 0.49
LMNB1-204ENST00000463908 ZC3H12BQ5HYM0 836 aaKnown RBP18.14■□□□□ 0.49
LMNB1-204ENST00000463908 PRAMEF9Q5VWM5 478 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 RNF44Q7L0R7 432 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 TRABD2AQ86V40 505 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 LCA5Q86VQ0 697 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 DTX1Q86Y01 620 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 PLD3Q8IV08 490 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 OR8K5Q8NH50 307 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 UBTD2Q8WUN7 234 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 SLC5A11Q8WWX8 675 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 TSNARE1Q96NA8 513 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 OR2A5Q96R48 311 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 MRPL46Q9H2W6 279 aaKnown RBP18.14■□□□□ 0.49
LMNB1-204ENST00000463908 ENAMQ9NRM1 1142 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 EMCNQ9ULC0 261 aa18.14■□□□□ 0.49
LMNB1-204ENST00000463908 TMEM184BQ9Y519 407 aaPredicted RBP18.14■□□□□ 0.49
LMNB1-204ENST00000463908 TEX51A0A1B0GUA7 166 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.13■□□□□ 0.49
LMNB1-204ENST00000463908 HAT1O14929 419 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 LCMT2O60294 686 aaKnown RBP18.13■□□□□ 0.49
LMNB1-204ENST00000463908 STK17BO94768 372 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 IPO13O94829 963 aaKnown RBP18.13■□□□□ 0.49
LMNB1-204ENST00000463908 DLGAP3O95886 979 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 NTRK1P04629 796 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 KRT4P19013 534 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 ALDH18A1P54886 795 aaKnown RBP18.13■□□□□ 0.49
LMNB1-204ENST00000463908 ITGA1P56199 1179 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 NAA25Q14CX7 972 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 SETDB1Q15047 1291 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 CYB5D1Q6P9G0 228 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 NXPE4Q6UWF7 544 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 ADCK2Q7Z695 626 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 C4orf33Q8N1A6 199 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 SNIP1Q8TAD8 396 aaKnown RBP18.13■□□□□ 0.49
LMNB1-204ENST00000463908 ZFYVE21Q9BQ24 234 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 SPNS1Q9H2V7 528 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 C12orf65Q9H3J6 166 aaKnown RBP18.13■□□□□ 0.49
LMNB1-204ENST00000463908 CNOT10Q9H9A5 744 aaKnown RBP18.13■□□□□ 0.49
LMNB1-204ENST00000463908 FANCEQ9HB96 536 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 STARD5Q9NSY2 213 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 DNAJC11Q9NVH1 559 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 KCNE2Q9Y6J6 123 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 LAMA5O15230 3695 aa18.13■□□□□ 0.49
LMNB1-204ENST00000463908 FEZF1A0PJY2 475 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 H0YGG7 62 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 CCNT2O60583 730 aaKnown RBP18.12■□□□□ 0.49
LMNB1-204ENST00000463908 SRPX2O60687 465 aaPredicted RBP18.12■□□□□ 0.49
LMNB1-204ENST00000463908 SCRG1O75711 98 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 OR2B3O76000 313 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 KIAA0754O94854 1291 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 SIX3O95343 332 aaPredicted RBP18.12■□□□□ 0.49
LMNB1-204ENST00000463908 GFAPP14136 432 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 CRHR1P34998 444 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 GCGRP47871 477 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 ARF3P61204 181 aaPredicted RBP18.12■□□□□ 0.49
LMNB1-204ENST00000463908 MEF2AQ02078 507 aaPredicted RBP18.12■□□□□ 0.49
LMNB1-204ENST00000463908 CDC16Q13042 620 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 PCBP2Q15366 365 aaKnown RBP eCLIP18.12■□□□□ 0.49
LMNB1-204ENST00000463908 TGIF1Q15583 401 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 KRT71Q3SY84 523 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 WASHC2DQ5SRD0 308 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 CEP85LQ5SZL2 805 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 SLCO4C1Q6ZQN7 724 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 PROSER1Q86XN7 944 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 ZNF740Q8NDX6 193 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 SELENOSQ9BQE4 189 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 ULBP3Q9BZM4 244 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 AKIRIN1Q9H9L7 192 aaPredicted RBP18.12■□□□□ 0.49
LMNB1-204ENST00000463908 DYRK1BQ9Y463 629 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 PCDHB3Q9Y5E6 796 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 FREM2Q5SZK8 3169 aa18.12■□□□□ 0.49
LMNB1-204ENST00000463908 KCNE1BA0A087WTH5 132 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 TMEM8BA6NDV4 472 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 E7EQ34 232 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 ZNF749O43361 778 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 EZRP15311 586 aaKnown RBP18.11■□□□□ 0.49
LMNB1-204ENST00000463908 H2AFXP16104 143 aaPredicted RBP18.11■□□□□ 0.49
LMNB1-204ENST00000463908 CREB1P16220 341 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 GNAZP19086 355 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 VARSP26640 1264 aaKnown RBP18.11■□□□□ 0.49
LMNB1-204ENST00000463908 CD82P27701 267 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 EIF2S3P41091 472 aaKnown RBP18.11■□□□□ 0.49
LMNB1-204ENST00000463908 CCT5P48643 541 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 CCR8P51685 355 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 VSX2P58304 361 aaPredicted RBP18.11■□□□□ 0.49
LMNB1-204ENST00000463908 TNFAIP8L3Q5GJ75 292 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 LRIG3Q6UXM1 1119 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 TMEM126BQ8IUX1 230 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 ZNF655Q8N720 491 aaPredicted RBP18.11■□□□□ 0.49
LMNB1-204ENST00000463908 PTGR2Q8N8N7 351 aaPredicted RBP18.11■□□□□ 0.49
LMNB1-204ENST00000463908 BANPQ8N9N5 519 aa18.11■□□□□ 0.49
LMNB1-204ENST00000463908 ZCCHC14Q8WYQ9 949 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms