RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ALOX15P16050 662 aaPredicted RBP13.79□□□□□ -0.2
COL6A1-202ENST00000463060 CCR8P51685 355 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 LIMK1P53667 647 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 CCL7P80098 99 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 RELAQ04206 551 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 SH2D4BQ5SQS7 431 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 STPG1Q5TH74 334 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 FCRL6Q6DN72 434 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 RNF165Q6ZSG1 346 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 TRIM73Q86UV7 250 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 CRLF3Q8IUI8 442 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 LAS2Q8IYD9 372 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 CDYL2Q8N8U2 506 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 Q8N9G6 341 aaPredicted RBP13.79□□□□□ -0.2
COL6A1-202ENST00000463060 ZNF740Q8NDX6 193 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 WDR20Q8TBZ3 569 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 IFI44Q8TCB0 444 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 MAGEB10Q96LZ2 347 aaPredicted RBP13.79□□□□□ -0.2
COL6A1-202ENST00000463060 PRAP1Q96NZ9 151 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 CCDC3Q9BQI4 270 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 SLC29A3Q9BZD2 475 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 PITHD1Q9GZP4 211 aaPredicted RBP13.79□□□□□ -0.2
COL6A1-202ENST00000463060 EPN3Q9H201 632 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 SEMA6CQ9H3T2 930 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 TUBB1Q9H4B7 451 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 MRPS30Q9NP92 439 aaKnown RBP13.79□□□□□ -0.2
COL6A1-202ENST00000463060 SNX7Q9UNH6 387 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 TIMM22Q9Y584 194 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 DNAJC15Q9Y5T4 150 aa13.79□□□□□ -0.2
COL6A1-202ENST00000463060 MN1Q10571 1320 aaPredicted RBP13.79□□□□□ -0.2
COL6A1-202ENST00000463060 UNC13CQ8NB66 2214 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 A0A0J9YY10 115 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 GSAPA4D1B5 854 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 NTN3O00634 580 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-202ENST00000463060 CAPN5O15484 640 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-202ENST00000463060 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
COL6A1-202ENST00000463060 NRP2O60462 931 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 GP1BAP07359 652 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-202ENST00000463060 SERPINB3P29508 390 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 CSF2RBP32927 897 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 HK2P52789 917 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 GFERP55789 205 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 DAB2P98082 770 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 REEP5Q00765 189 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 LAPTM5Q13571 262 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 ZIC1Q15915 447 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 CLEC6AQ6EIG7 209 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 ARMC6Q6NXE6 501 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 FBXO42Q6P3S6 717 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 FIGLAQ6QHK4 219 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 ZNF574Q6ZN55 896 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-202ENST00000463060 TMPRSS9Q7Z410 1059 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 MAVSQ7Z434 540 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 TMPRSS11BQ86T26 416 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 WDR75Q8IWA0 830 aaKnown RBP13.78□□□□□ -0.2
COL6A1-202ENST00000463060 KIRREL3Q8IZU9 778 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 CARFQ8N187 725 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 OR7G3Q8NG95 312 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 METTL6Q8TCB7 284 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 NCSTNQ92542 709 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 TRAPPC9Q96Q05 1148 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 CD180Q99467 661 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 CHRNA10Q9GZZ6 450 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 KCNK13Q9HB14 408 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 C1GALT1Q9NS00 363 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 ANKMY1Q9P2S6 941 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 FTSJ1Q9UET6 329 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 PILRAQ9UKJ1 303 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 KLHL20Q9Y2M5 609 aa13.78□□□□□ -0.2
COL6A1-202ENST00000463060 RIF1Q5UIP0 2472 aaKnown RBP13.78□□□□□ -0.2
COL6A1-202ENST00000463060 SLCO1B7G3V0H7 640 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 MANBAO00462 879 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 ZW10O43264 779 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 DUX1O43812 170 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 LCMT2O60294 686 aaKnown RBP13.77□□□□□ -0.21
COL6A1-202ENST00000463060 JUNP05412 331 aaKnown RBP13.77□□□□□ -0.21
COL6A1-202ENST00000463060 PVRP15151 417 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 ST6GAL1P15907 406 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 MAGP20916 626 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 ACADVLP49748 655 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 HTR6P50406 440 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 MEF2AQ02078 507 aaPredicted RBP13.77□□□□□ -0.21
COL6A1-202ENST00000463060 ZNF33BQ06732 778 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 SLBPQ14493 270 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL6A1-202ENST00000463060 ZRSR2Q15696 482 aaKnown RBP13.77□□□□□ -0.21
COL6A1-202ENST00000463060 CPSF6Q16630 551 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL6A1-202ENST00000463060 CLPPQ16740 277 aaPredicted RBP13.77□□□□□ -0.21
COL6A1-202ENST00000463060 AMZ1Q400G9 498 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 TCHHL1Q5QJ38 904 aaPredicted RBP13.77□□□□□ -0.21
COL6A1-202ENST00000463060 USP53Q70EK8 1073 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 VN1R5Q7Z5H4 357 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 PIGWQ7Z7B1 504 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 PLXDC1Q8IUK5 500 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 USP7Q93009 1102 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 ZDHHC12Q96GR4 267 aa13.77□□□□□ -0.21
COL6A1-202ENST00000463060 AHCYL2Q96HN2 611 aaKnown RBP13.77□□□□□ -0.21
COL6A1-202ENST00000463060 FAR2Q96K12 515 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms