RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 CPEB1Q9BZB8 566 aaKnown RBP17.55■□□□□ 0.4
HPS3-202ENST00000460120 ZDHHC4Q9NPG8 344 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 KIF17Q9P2E2 1029 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 BAG5Q9UL15 447 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 ERVW-1Q9UQF0 538 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 KPNA3O00505 521 aaPredicted RBP17.55■□□□□ 0.4
HPS3-202ENST00000460120 CTSAP10619 480 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 TIMP2P16035 220 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 VIPR1P32241 457 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 WNT3P56703 355 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 STARD3Q14849 445 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 PLEKHS1Q5SXH7 462 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 TMEM220Q6QAJ8 160 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 ZNF420Q8TAQ5 688 aaPredicted RBP17.55■□□□□ 0.4
HPS3-202ENST00000460120 HDAC2Q92769 488 aaKnown RBP17.55■□□□□ 0.4
HPS3-202ENST00000460120 TESCQ96BS2 214 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 TMEM121BQ9BXQ6 578 aaPredicted RBP17.55■□□□□ 0.4
HPS3-202ENST00000460120 PLGRKTQ9HBL7 147 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.55■□□□□ 0.4
HPS3-202ENST00000460120 STOX2Q9P2F5 926 aaPredicted RBP17.55■□□□□ 0.4
HPS3-202ENST00000460120 OGDHLQ9ULD0 1010 aa17.55■□□□□ 0.4
HPS3-202ENST00000460120 KCNK5O95279 499 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 ANXA4P09525 319 aaPredicted RBP17.54■□□□□ 0.4
HPS3-202ENST00000460120 DAPP51397 102 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 PSMD7P51665 324 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 ISL1P61371 349 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 SKIV2LQ15477 1246 aaKnown RBP17.54■□□□□ 0.4
HPS3-202ENST00000460120 VMACQ2NL98 169 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 RBM48Q5RL73 367 aaKnown RBP17.54■□□□□ 0.4
HPS3-202ENST00000460120 GALNT18Q6P9A2 607 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 PIWIL3Q7Z3Z3 882 aaKnown RBP17.54■□□□□ 0.4
HPS3-202ENST00000460120 ZZZ3Q8IYH5 903 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 CHPFQ8IZ52 775 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 CHCHD4Q8N4Q1 142 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 OR4K1Q8NGD4 311 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 NRBF2Q96F24 287 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 FUNDC2Q9BWH2 189 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 YTHDF1Q9BYJ9 559 aaKnown RBP17.54■□□□□ 0.4
HPS3-202ENST00000460120 SPHK2Q9NRA0 654 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 TDP1Q9NUW8 608 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 ERVK-18Q9QC07 812 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 RAPGEFL1Q9UHV5 662 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 PPIL1Q9Y3C6 166 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 SAMHD1Q9Y3Z3 626 aaKnown RBP17.54■□□□□ 0.4
HPS3-202ENST00000460120 TOR1BO14657 336 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 BCL10O95999 233 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 MPC1LP0DKB6 136 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 PRPS1L1P21108 318 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 TTKP33981 857 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 PTPN5P54829 565 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 ZNF284Q2VY69 593 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 GGTA1PQ4G0N0 100 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 CATSPEREQ5SY80 951 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.54■□□□□ 0.4
HPS3-202ENST00000460120 OR2T5Q6IEZ7 315 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 CCDC149Q6ZUS6 474 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 SYTL1Q8IYJ3 562 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 ATG16L2Q8NAA4 619 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 PJA1Q8NG27 643 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 OR2T29Q8NH02 315 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 CSGALNACT1Q8TDX6 532 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 NODALQ96S42 347 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 PKP4Q99569 1192 aa17.54■□□□□ 0.4
HPS3-202ENST00000460120 SAMD4AQ9UPU9 718 aaKnown RBP17.54■□□□□ 0.4
HPS3-202ENST00000460120 OBSL1O75147 1896 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 COQ9O75208 318 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 SEC14L2O76054 403 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 CCNDBP1O95273 360 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 ADH1AP07327 375 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 ELFN1P0C7U0 828 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 HOXB9P17482 250 aaPredicted RBP17.53■□□□□ 0.4
HPS3-202ENST00000460120 RAD23AP54725 363 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 MLLT10P55197 1068 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 GBX1Q14549 363 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 SPCS2Q15005 226 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 ZNF691Q5VV52 312 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 METTL2BQ6P1Q9 378 aaKnown RBP17.53■□□□□ 0.4
HPS3-202ENST00000460120 Q6ZPB1 254 aaPredicted RBP17.53■□□□□ 0.4
HPS3-202ENST00000460120 PTOV1Q86YD1 416 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 AP2M1Q96CW1 435 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 DUSP26Q9BV47 211 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 SH2B3Q9UQQ2 575 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 PRKAB1Q9Y478 270 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 PLXNB3Q9ULL4 1909 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 ABHD14A-ACY1A0A1B0GW23 586 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 GABRR3A8MPY1 467 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 ANGPTL1O95841 491 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 FABP3P05413 133 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 CYP2A6P11509 494 aaPredicted RBP17.53■□□□□ 0.4
HPS3-202ENST00000460120 HTR1BP28222 390 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 KDELR2P33947 212 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 MNX1P50219 401 aaPredicted RBP17.53■□□□□ 0.4
HPS3-202ENST00000460120 RPS13P62277 151 aaKnown RBP17.53■□□□□ 0.4
HPS3-202ENST00000460120 MESP2Q0VG99 397 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 CDK5R2Q13319 367 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 LAIR1Q6GTX8 287 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 C16orf87Q6PH81 154 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 SPRED2Q7Z698 418 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 HIPK1Q86Z02 1210 aa17.53■□□□□ 0.4
HPS3-202ENST00000460120 HUS1BQ8NHY5 278 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms