RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 MYO1HQ8N1T3 1032 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 ZADH2Q8N4Q0 377 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 CSNK1A1LQ8N752 337 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 RBMXL3Q8N7X1 1067 aaKnown RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 GPATCH11Q8N954 259 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 BBOF1Q8ND07 529 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 STT3BQ8TCJ2 826 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 ATL1Q8WXF7 558 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 COL26A1Q96A83 441 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 MIEF2Q96C03 454 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 CERS2Q96G23 380 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 HIST1H2AHQ96KK5 128 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 SLC30A3Q99726 388 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 NAPGQ99747 312 aaPredicted RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 HIST1H2AJQ99878 128 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 TRIM56Q9BRZ2 755 aaKnown RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 HAUS8Q9BT25 410 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 H2AFJQ9BTM1 129 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 SARGQ9BW04 601 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 TRIM54Q9BYV2 358 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 CCDC177Q9NQR7 707 aaPredicted RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 IARS2Q9NSE4 1012 aaKnown RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 NSMCE4AQ9NXX6 385 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 CIDEBQ9UHD4 219 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 TAC3Q9UHF0 121 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 CDC23Q9UJX2 597 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 NOVA2Q9UNW9 492 aaKnown RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 B3GNT3Q9Y2A9 372 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 HS3ST3B1Q9Y662 390 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 ZIC2O95409 532 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-228ENST00000459788 AHSGP02765 367 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 ANXA5P08758 320 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 ZGLP1P0C6A0 271 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 IL10P22301 178 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 MCM3P25205 808 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 GRK3P35626 688 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 TERF1P54274 439 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 MLLT10P55197 1068 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 ARL4CP56559 192 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 IL2P60568 153 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 MPP1Q00013 466 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 DR1Q01658 176 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 INPP5JQ15735 1006 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-228ENST00000459788 IGFBP7Q16270 282 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 RBBP7Q16576 425 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 HIF1AQ16665 826 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 NADK2Q4G0N4 442 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 COLEC12Q5KU26 742 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 FAM69BQ5VUD6 431 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 AGAP7PQ5VUJ5 663 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 ATG9BQ674R7 924 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 B3GNTL1Q67FW5 361 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-228ENST00000459788 FAM45BPQ6NSW5 357 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 SUSD1Q6UWL2 747 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 KIRREL2Q6UWL6 708 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 LCTLQ6UWM7 567 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 RIPOR1Q6ZS17 1223 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 Q6ZS92 163 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 SLC26A11Q86WA9 606 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 CPNE9Q8IYJ1 553 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 ARHGEF39Q8N4T4 335 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 Q8NA96 180 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 OR11G2Q8NGC1 345 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 FAM45AQ8TCE6 357 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 PPP4R1Q8TF05 950 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 FAM136AQ96C01 138 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 SNF8Q96H20 258 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 CABS1Q96KC9 395 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 C10orf90Q96M02 699 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 AGAP4Q96P64 663 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 LMF1Q96S06 567 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 BARD1Q99728 777 aaKnown RBP9.53□□□□□ -0.88
HDLBP-228ENST00000459788 CRB3Q9BUF7 120 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 ACAT2Q9BWD1 397 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 SGPP1Q9BX95 441 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 LHPPQ9H008 270 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 DRC3Q9H069 523 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 CLK4Q9HAZ1 481 aaKnown RBP9.53□□□□□ -0.88
HDLBP-228ENST00000459788 CUEDC1Q9NWM3 386 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-228ENST00000459788 TRMT1Q9NXH9 659 aaKnown RBP9.53□□□□□ -0.88
HDLBP-228ENST00000459788 STOX2Q9P2F5 926 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-228ENST00000459788 FBXL4Q9UKA2 621 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 PLAAQ9Y263 795 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 RUVBL1Q9Y265 456 aaKnown RBP9.53□□□□□ -0.88
HDLBP-228ENST00000459788 TEX264Q9Y6I9 313 aa9.53□□□□□ -0.88
HDLBP-228ENST00000459788 DIDO1Q9BTC0 2240 aaKnown RBP9.52□□□□□ -0.88
HDLBP-228ENST00000459788 LOC102723996A0A087X1L8 192 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 PABPN1LA6NDY0 278 aaKnown RBP9.52□□□□□ -0.89
HDLBP-228ENST00000459788 A6NL46 340 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 E7ESA3 106 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 PYCARD-AS1I3L0S3 204 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 CDK2AP1O14519 115 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 MAP2K7O14733 419 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 SEC31AO94979 1220 aaKnown RBP9.52□□□□□ -0.89
HDLBP-228ENST00000459788 NSA2O95478 260 aaKnown RBP9.52□□□□□ -0.89
HDLBP-228ENST00000459788 SYF2O95926 243 aaKnown RBP9.52□□□□□ -0.89
HDLBP-228ENST00000459788 EIF2S1P05198 315 aaKnown RBP9.52□□□□□ -0.89
HDLBP-228ENST00000459788 ICAM2P13598 275 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 ACPPP15309 386 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 CXCR2P25025 360 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms