RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	NPIPA1	Q9UND3	350 aa		12.5	□□□□□ -0.41
SNHG17-208	ENST00000456953	CDC14A	Q9UNH5	594 aa		12.5	□□□□□ -0.41
SNHG17-208	ENST00000456953	R3HDM2	Q9Y2K5	976 aa	Known RBP	12.5	□□□□□ -0.41
SNHG17-208	ENST00000456953	AAR2	Q9Y312	384 aa	Known RBP	12.5	□□□□□ -0.41
SNHG17-208	ENST00000456953	GTF3C1	Q12789	2109 aa		12.5	□□□□□ -0.41
SNHG17-208	ENST00000456953	AKAP6	Q13023	2319 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	INTS1	Q8N201	2190 aa	Known RBP	12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	ASPDH	A6ND91	283 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	TMEM200C	A6NKL6	621 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	PRRG2	O14669	202 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	ADAM10	O14672	748 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	RASGRF2	O14827	1237 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	PRPF4	O43172	522 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	ASNA1	O43681	348 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	TSPAN12	O95859	305 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	HEXB	P07686	556 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	PRSS56	P0CW18	603 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	RBP3	P10745	1247 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	IST1	P53990	364 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	OLIG2	Q13516	323 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	SNX1	Q13596	522 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	ITIH4	Q14624	930 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	PCOLCE	Q15113	449 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	WHAMMP3	Q1A5X7	153 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	FRMPD2B	Q6IN97	320 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	PACS1	Q6VY07	963 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	NAPRT	Q6XQN6	538 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	TAX1BP1	Q86VP1	789 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	TMEM200A	Q86VY9	491 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	DOLPP1	Q86YN1	238 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	SIAH3	Q8IW03	269 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	LMNTD1	Q8N9Z9	388 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	IMMP1L	Q96LU5	166 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	C10orf90	Q96M02	699 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	TUBB6	Q9BUF5	446 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	TGIF2	Q9GZN2	237 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	KLK4	Q9Y5K2	254 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	JMJD1C	Q15652	2540 aa		12.49	□□□□□ -0.41
SNHG17-208	ENST00000456953	LIAS	O43766	372 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	ZNF189	O75820	626 aa	Predicted RBP	12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	ERVK-10	P10266	1014 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	EEF1D	P29692	281 aa	Known RBP	12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	EMP3	P54852	163 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	CCNG2	Q16589	344 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	DENND5A	Q6IQ26	1287 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	TMEM205	Q6UW68	189 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	C3P1	Q6ZMU1	363 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	DCUN1D3	Q8IWE4	304 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	SLC22A15	Q8IZD6	547 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	GHDC	Q8N2G8	530 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	DNAAF3	Q8N9W5	541 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	MDS2	Q8NDY4	140 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	NINJ1	Q92982	152 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	MAGOHB	Q96A72	148 aa	Known RBP	12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	MVB12A	Q96EY5	273 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	FRMD6	Q96NE9	622 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	ZNF559	Q9BR84	538 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	TRIM51	Q9BSJ1	452 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	YIPF2	Q9BWQ6	316 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	ARNT2	Q9HBZ2	717 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	MKKS	Q9NPJ1	570 aa	Predicted RBP	12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	KLHL1	Q9NR64	748 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	NLE1	Q9NVX2	485 aa	Predicted RBP	12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	KCNN3	Q9UGI6	736 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	MKL2	Q9ULH7	1088 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	ZNF148	Q9UQR1	794 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	MRFAP1	Q9Y605	127 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	PRSS21	Q9Y6M0	314 aa		12.48	□□□□□ -0.41
SNHG17-208	ENST00000456953	LOC105369274	A0A096LPK9	316 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	LOC102723532	A0A0G2JNH3	316 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953		A8MUI8	341 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	STK10	O94804	968 aa	Known RBP	12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	EIF2S1	P05198	315 aa	Known RBP	12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	OR56A5	P0C7T3	313 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	CD46	P15529	392 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	FOLH1	Q04609	750 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	TUBA3C	Q13748	450 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	GRB7	Q14451	532 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	PRPSAP1	Q14558	356 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	SIX1	Q15475	284 aa	Predicted RBP	12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	PRTG	Q2VWP7	1150 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	ACER2	Q5QJU3	275 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	CES4A	Q5XG92	561 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	TUBA3E	Q6PEY2	450 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	UNC5D	Q6UXZ4	953 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	MICALCL	Q6ZW33	695 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	RNF44	Q7L0R7	432 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	CHERP	Q8IWX8	916 aa	Known RBP	12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	OR4N4	Q8N0Y3	316 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	BEST3	Q8N1M1	668 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	PRELID2	Q8N945	189 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	TMEM178A	Q8NBL3	297 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	SLC35B2	Q8TB61	432 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	SCMH1	Q96GD3	660 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	CABS1	Q96KC9	395 aa		12.47	□□□□□ -0.41

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