RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 LOC102723532A0A0G2JNH3 316 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 A0A0J9YVX5 310 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 A0A1B0GX78 115 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 AGPSO00116 658 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 MYO1CO00159 1063 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 SOCS6O14544 535 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 DSCR3O14972 297 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 URI1O94763 535 aaPredicted RBP12.35□□□□□ -0.43
TREX1-203ENST00000456089 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 AHSGP02765 367 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 COL8A1P27658 744 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 GLRBP48167 497 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 PNLIPRP1P54315 467 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 CAV1Q03135 178 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 MGAT5Q09328 741 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 NKG7Q16617 165 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.35□□□□□ -0.43
TREX1-203ENST00000456089 THEMIS2Q5TEJ8 643 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 STEAP4Q687X5 459 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 UBE2R2Q712K3 238 aaPredicted RBP12.35□□□□□ -0.43
TREX1-203ENST00000456089 OVCH1Q7RTY7 1134 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 GALNT7Q86SF2 657 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 CUZD1Q86UP6 607 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 IQCKQ8N0W5 287 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 OR4N4Q8N0Y3 316 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 GIMAP7Q8NHV1 300 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 MCOLN3Q8TDD5 553 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 ASB11Q8WXH4 323 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 TRIM44Q96DX7 344 aaPredicted RBP12.35□□□□□ -0.43
TREX1-203ENST00000456089 PKP4Q99569 1192 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 SPSB2Q99619 263 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 SLC30A3Q99726 388 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 ACAT2Q9BWD1 397 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 ILKAPQ9H0C8 392 aaPredicted RBP12.35□□□□□ -0.43
TREX1-203ENST00000456089 ATP13A2Q9NQ11 1180 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 NSMCE4AQ9NXX6 385 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 C5AR2Q9P296 337 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 TXNDC16Q9P2K2 825 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 CORO1CQ9ULV4 474 aaPredicted RBP12.35□□□□□ -0.43
TREX1-203ENST00000456089 B3GNT3Q9Y2A9 372 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 SVILO95425 2214 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 CROCCQ5TZA2 2017 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 A0A1W2PPV9 198 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 TARM1B6A8C7 271 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 FFAR3O14843 346 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.43
TREX1-203ENST00000456089 GPR42O15529 346 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 EIF2S1P05198 315 aaKnown RBP12.34□□□□□ -0.43
TREX1-203ENST00000456089 C8GP07360 202 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 HIST1H2AGP0C0S8 130 aaPredicted RBP12.34□□□□□ -0.43
TREX1-203ENST00000456089 HIST1H2ADP20671 130 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 SAT1P21673 171 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 ARSFP54793 590 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 PLTPP55058 493 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 IL2P60568 153 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 FRG1Q14331 258 aaKnown RBP12.34□□□□□ -0.43
TREX1-203ENST00000456089 TCTE1Q5JU00 501 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 WASHC2DQ5SRD0 308 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 FAM45BPQ6NSW5 357 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 TRMT10BQ6PF06 316 aaKnown RBP12.34□□□□□ -0.43
TREX1-203ENST00000456089 SUSD1Q6UWL2 747 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 KIRREL2Q6UWL6 708 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 CAPN12Q6ZSI9 719 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 PIWIL4Q7Z3Z4 852 aaKnown RBP12.34□□□□□ -0.43
TREX1-203ENST00000456089 HPS6Q86YV9 775 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 AMER2Q8N7J2 671 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 TTC29Q8NA56 475 aaPredicted RBP12.34□□□□□ -0.43
TREX1-203ENST00000456089 OR2L3Q8NG85 312 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 FAM45AQ8TCE6 357 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 CDKL2Q92772 493 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 LINGO1Q96FE5 620 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 HIST1H2AHQ96KK5 128 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 HIST1H2AJQ99878 128 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 H2AFJQ9BTM1 129 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 TRIM54Q9BYV2 358 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 SLC29A3Q9BZD2 475 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 SYNPO2LQ9H987 977 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 MRPS30Q9NP92 439 aaKnown RBP12.34□□□□□ -0.43
TREX1-203ENST00000456089 SAYSD1Q9NPB0 183 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 SLC17A6Q9P2U8 582 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 ERRFI1Q9UJM3 462 aaPredicted RBP12.34□□□□□ -0.43
TREX1-203ENST00000456089 VWA7Q9Y334 891 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 HS3ST3B1Q9Y662 390 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 CPAMD8Q8IZJ3 1885 aa12.34□□□□□ -0.43
TREX1-203ENST00000456089 HYKKA2RU49 373 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 E7ESA3 106 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 GFYI3L273 518 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 CBX6O95503 412 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 SLC16A8O95907 504 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 ALPPP05187 535 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 CD63P08962 238 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 MMP11P24347 488 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 GABRB3P28472 473 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 SLC12A2P55011 1212 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 CDKN2DP55273 166 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 ILF2Q12905 390 aaKnown RBP12.33□□□□□ -0.44
TREX1-203ENST00000456089 AIMP2Q13155 320 aaKnown RBP12.33□□□□□ -0.44
TREX1-203ENST00000456089 GRM7Q14831 915 aa12.33□□□□□ -0.44
TREX1-203ENST00000456089 FASTKD3Q14CZ7 662 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms