RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ZDHHC3Q9NYG2 299 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 PCDHB3Q9Y5E6 796 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 ARVCFO00192 962 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
SEC16A-207ENST00000453963 SMSP52788 366 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 CDK6Q00534 326 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 EIPR1Q53HC9 387 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 STX12Q86Y82 276 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 SCML4Q8N228 414 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 ASCC1Q8N9N2 400 aaKnown RBP11.72□□□□□ -0.53
SEC16A-207ENST00000453963 C11orf84Q9BUA3 381 aaPredicted RBP11.72□□□□□ -0.53
SEC16A-207ENST00000453963 PRRG4Q9BZD6 226 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 CERS4Q9HA82 394 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 TPT1P8Q9HAU6 139 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 MLXQ9UH92 298 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 CBSLP0DN79 551 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 CBSP35520 551 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 ARF5P84085 180 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 ZNF155Q12901 538 aaPredicted RBP11.72□□□□□ -0.53
SEC16A-207ENST00000453963 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 C6orf136Q5SQH8 315 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 FBXL22Q6P050 247 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 TMEM220Q6QAJ8 160 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 HFE2Q6ZVN8 426 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 SLC15A3Q8IY34 581 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 SLC37A3Q8NCC5 494 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 ZMIZ2Q8NF64 920 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 OR14C36Q8NHC7 312 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 METTL21AQ8WXB1 218 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 ING5Q8WYH8 240 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 GMLQ99445 158 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 GPER1Q99527 375 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 COMMD4Q9H0A8 199 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 RC3H2Q9HBD1 1191 aaKnown RBP11.72□□□□□ -0.53
SEC16A-207ENST00000453963 SIX4Q9UIU6 781 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 ANXA2P2A6NMY6 339 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 BOLA2-SMG1P6H3BVE0 249 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 PRODHO43272 600 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 OR1F1O43749 312 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 SNAPC5O75971 98 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 ANXA2P07355 339 aaKnown RBP11.72□□□□□ -0.53
SEC16A-207ENST00000453963 RFC2P35250 354 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 CAMK1Q14012 370 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 PPP1R3AQ16821 1122 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 PIGGQ5H8A4 983 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 TECRLQ5HYJ1 363 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 SNAP47Q5SQN1 464 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 MBOAT1Q6ZNC8 495 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 ASB18Q6ZVZ8 466 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 NCSTNQ92542 709 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 RBM18Q96H35 190 aaKnown RBP11.72□□□□□ -0.53
SEC16A-207ENST00000453963 KCNA7Q96RP8 456 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 IFT27Q9BW83 186 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 CHIAQ9BZP6 476 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 MINDY3Q9H8M7 445 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 CD84Q9UIB8 345 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 CMAHPQ9Y471 501 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 HSPB11Q9Y547 144 aa11.72□□□□□ -0.53
SEC16A-207ENST00000453963 TRIM64CA6NLI5 447 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 LOC730098B7Z3J9 87 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 MATN4O95460 622 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 EPOP01588 193 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 OPN1SWP03999 348 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 ALPPP05187 535 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 ARCN1P48444 511 aaKnown RBP11.71□□□□□ -0.53
SEC16A-207ENST00000453963 DIO3P55073 304 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 GABARAPL2P60520 117 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 ZNF630Q2M218 657 aaPredicted RBP11.71□□□□□ -0.53
SEC16A-207ENST00000453963 ATG9BQ674R7 924 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 CADM2Q8N3J6 435 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 LCN9Q8WX39 176 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 GAS2L1Q99501 681 aaPredicted RBP11.71□□□□□ -0.53
SEC16A-207ENST00000453963 ITM2CQ9NQX7 267 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 ZCCHC3Q9NUD5 404 aaKnown RBP11.71□□□□□ -0.53
SEC16A-207ENST00000453963 DUS2Q9NX74 493 aaKnown RBP11.71□□□□□ -0.53
SEC16A-207ENST00000453963 HCN4Q9Y3Q4 1203 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 FKBP7Q9Y680 259 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 A0A0J9YVX5 310 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 A0A0U1RQF3 1178 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 PRSS51A0A1B0GVH4 220 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 ENPP3O14638 875 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 NRP1O14786 923 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 DHRS4L1P0CG22 281 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 GBX2P52951 348 aaPredicted RBP11.71□□□□□ -0.53
SEC16A-207ENST00000453963 GNG2P59768 71 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 EIF5AP63241 154 aaKnown RBP11.71□□□□□ -0.53
SEC16A-207ENST00000453963 JAG1P78504 1218 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 SMU1Q2TAY7 513 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 SMARCD3Q6STE5 483 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 RPS27LQ71UM5 84 aaKnown RBP11.71□□□□□ -0.53
SEC16A-207ENST00000453963 TMEM135Q86UB9 458 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 GPALPP1Q8IXQ4 340 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 TMEM203Q969S6 136 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 ACDQ96AP0 544 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 PRICKLE1Q96MT3 831 aaPredicted RBP11.71□□□□□ -0.53
SEC16A-207ENST00000453963 ZNF382Q96SR6 550 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 SMOC2Q9H3U7 446 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 GIMAP2Q9UG22 337 aa11.71□□□□□ -0.53
SEC16A-207ENST00000453963 METTL21EPA6NDL7 271 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 DUXAA6NLW8 204 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms