RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 IMPA1P29218 277 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 CMPK1P30085 196 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 RPA3P35244 121 aaPredicted RBP14.06□□□□□ -0.16
VPS16-205ENST00000453689 DLSTP36957 453 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 GLRBP48167 497 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 CDKL1Q00532 357 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 TAP2Q03519 686 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 TSTA3Q13630 321 aaPredicted RBP14.06□□□□□ -0.16
VPS16-205ENST00000453689 TGFBIQ15582 683 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 TNFAIP8L3Q5GJ75 292 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 TECRLQ5HYJ1 363 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 GPSM1Q86YR5 675 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 SYTL1Q8IYJ3 562 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 GPR135Q8IZ08 494 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 C4orf33Q8N1A6 199 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 CT55Q8WUE5 264 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 ZUFSPQ96AP4 578 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 ALKBH8Q96BT7 664 aaKnown RBP14.06□□□□□ -0.16
VPS16-205ENST00000453689 ZBTB9Q96C00 473 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 CLIP3Q96DZ5 547 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 SLC45A3Q96JT2 553 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 SCYL1Q96KG9 808 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 PKNOX2Q96KN3 472 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 CCDC138Q96M89 665 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 LRFN5Q96NI6 719 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 SMC6Q96SB8 1091 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 ATOH8Q96SQ7 321 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 EFHD1Q9BUP0 239 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 ACTR5Q9H9F9 607 aaPredicted RBP14.06□□□□□ -0.16
VPS16-205ENST00000453689 TMBIM4Q9HC24 238 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 SLC6A20Q9NP91 592 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 ZNF358Q9NW07 568 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 ARL15Q9NXU5 204 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 DCDC2Q9UHG0 476 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 PLCL2Q9UPR0 1127 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 KLK4Q9Y5K2 254 aa14.06□□□□□ -0.16
VPS16-205ENST00000453689 FAM208BQ5VWN6 2430 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 SYCE1LA8MT33 242 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 COPEO14579 308 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 ZNF749O43361 778 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 NRP2O60462 931 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 SASH3O75995 380 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 OR2B3O76000 313 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 ANXA5P08758 320 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 TCN2P20062 427 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 RORAP35398 523 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 CYP4F2P78329 520 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 DNASE1L3Q13609 305 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 CDKL4Q5MAI5 379 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 FAM199XQ6PEV8 388 aaPredicted RBP14.05□□□□□ -0.16
VPS16-205ENST00000453689 MBOAT1Q6ZNC8 495 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 LRRC56Q8IYG6 542 aaPredicted RBP14.05□□□□□ -0.16
VPS16-205ENST00000453689 DSELQ8IZU8 1212 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 ATL1Q8WXF7 558 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 APOPT1Q96IL0 206 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 DPH7Q9BTV6 452 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 SPRTNQ9H040 489 aaPredicted RBP14.05□□□□□ -0.16
VPS16-205ENST00000453689 MRPL46Q9H2W6 279 aaKnown RBP14.05□□□□□ -0.16
VPS16-205ENST00000453689 ACBD3Q9H3P7 528 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 UTP6Q9NYH9 597 aaKnown RBP14.05□□□□□ -0.16
VPS16-205ENST00000453689 NUDT4Q9NZJ9 180 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 STOX2Q9P2F5 926 aaPredicted RBP14.05□□□□□ -0.16
VPS16-205ENST00000453689 XPR1Q9UBH6 696 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 TAC3Q9UHF0 121 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 ACTL7BQ9Y614 415 aa14.05□□□□□ -0.16
VPS16-205ENST00000453689 MRPS18BQ9Y676 258 aaKnown RBP14.05□□□□□ -0.16
VPS16-205ENST00000453689 SCN3AQ9NY46 2000 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 ZNF891A8MT65 544 aaPredicted RBP14.04□□□□□ -0.16
VPS16-205ENST00000453689 MEN1O00255 615 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 DYNC1I1O14576 645 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 CTSVO60911 334 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 GUCA1CO95843 209 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 S100BP04271 92 aaPredicted RBP14.04□□□□□ -0.16
VPS16-205ENST00000453689 CRHR1P34998 444 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 CCT5P48643 541 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 RHDQ02161 417 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 ZC3H12BQ5HYM0 836 aaKnown RBP14.04□□□□□ -0.16
VPS16-205ENST00000453689 ICE2Q659A1 982 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 LCN10Q6JVE6 187 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 ZNF517Q6ZMY9 492 aaPredicted RBP14.04□□□□□ -0.16
VPS16-205ENST00000453689 MCATQ8IVS2 390 aaKnown RBP14.04□□□□□ -0.16
VPS16-205ENST00000453689 BANPQ8N9N5 519 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 PDPRQ8NCN5 879 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 STARD8Q92502 1023 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 TTC9Q92623 222 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 EXT2Q93063 718 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 FBXL8Q96CD0 374 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 UBL7Q96S82 380 aaPredicted RBP14.04□□□□□ -0.16
VPS16-205ENST00000453689 EGFL8Q99944 293 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 MRPL57Q9BQC6 102 aaKnown RBP14.04□□□□□ -0.16
VPS16-205ENST00000453689 SLC7A5P2Q9GIP4 190 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 MRPS30Q9NP92 439 aaKnown RBP14.04□□□□□ -0.16
VPS16-205ENST00000453689 ABCF3Q9NUQ8 709 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 ZNF446Q9NWS9 450 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 TMEM216Q9P0N5 145 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 GRID1Q9ULK0 1009 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 AP1M2Q9Y6Q5 423 aa14.04□□□□□ -0.16
VPS16-205ENST00000453689 IGKV1-8A0A0C4DH67 115 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 OR2A25A4D2G3 310 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 SUPT3HB4E1H0 165 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms