RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 FOXO6A8MYZ6 492 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 GOLGA8RI6L899 631 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 TYROBPO43914 113 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 GLRA3O75311 464 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 SLCO2B1O94956 709 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 TAS2R39P59534 338 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 NCF4Q15080 339 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 CTSL3PQ5NE16 218 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 C1orf189Q5VU69 101 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 FAM69BQ5VUD6 431 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 MLIPQ5VWP3 458 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 ZNF549Q6P9A3 640 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 FAM198BQ6UWH4 519 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 TAX1BP1Q86VP1 789 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 RAB42Q8N4Z0 105 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 BANPQ8N9N5 519 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 FLVCR1-AS1Q8TAF5 88 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 BIRC8Q96P09 236 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 IL17FQ96PD4 163 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 SLC25A23Q9BV35 468 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 CHRNA10Q9GZZ6 450 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 CAB39LQ9H9S4 337 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 G3BP2Q9UN86 482 aaKnown RBP17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 PLCL2Q9UPR0 1127 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 VWA7Q9Y334 891 aa17.3■□□□□ 0.36
SQSTM1-204ENST00000453046 A0A087X1B8 175 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 A0A096LPK6 155 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 COPEO14579 308 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 TM9SF1O15321 606 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 ZSCAN9O15535 394 aaPredicted RBP17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 HCRTR1O43613 425 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 VPS26AO75436 327 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 CAPN1P07384 714 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 CREB1P16220 341 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 MAGP20916 626 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 PEBP1P30086 187 aaKnown RBP17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 FMO4P31512 558 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 PGDP52209 483 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 SF1Q15637 639 aaKnown RBP17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 IGFBP7Q16270 282 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 RHBDD2Q6NTF9 364 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 TLDC1Q6P9B6 456 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 FAM20CQ8IXL6 584 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 DNAJC22Q8N4W6 341 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 ZNF655Q8N720 491 aaPredicted RBP17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 FOPNLQ96NB1 174 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 OLFM1Q99784 485 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 NDC1Q9BTX1 674 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 INTS7Q9NVH2 962 aaKnown RBP17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 TAS2R13Q9NYV9 303 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 SRPK3Q9UPE1 567 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 KLHL20Q9Y2M5 609 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 SEC16AO15027 2179 aa17.29■□□□□ 0.36
SQSTM1-204ENST00000453046 PHGDHO43175 533 aaKnown RBP17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 ZWINTO95229 277 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 WISP3O95389 354 aaPredicted RBP17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 C2P06681 752 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 GSTA1P08263 222 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 SLC35E2BP0CK96 405 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 CBSLP0DN79 551 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 COL6A2P12110 1019 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 CRHR1P34998 444 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 CBSP35520 551 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 GABRA4P48169 554 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 CCT5P48643 541 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 CDKN2DP55273 166 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 DCDP81605 110 aaKnown RBP17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 RAPH1Q70E73 1250 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 RAB43Q86YS6 212 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 LMNTD1Q8N9Z9 388 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 LINC01555Q8NAE3 123 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 OR2L8Q8NGY9 312 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 PROKR1Q8TCW9 393 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 ADAMTS17Q8TE56 1095 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 RAD51AP1Q96B01 352 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 RAB11FIP5Q9BXF6 653 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 IQCGQ9H095 443 aaKnown RBP17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 NKIRAS1Q9NYS0 192 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 IFT80Q9P2H3 777 aaPredicted RBP17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 DHCR7Q9UBM7 475 aaKnown RBP17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 NDOR1Q9UHB4 597 aa17.28■□□□□ 0.36
SQSTM1-204ENST00000453046 SPAG7O75391 227 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 CTSBP07858 339 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 CD63P08962 238 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 SAT1P21673 171 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 OTX2P32243 289 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 SLC26A3P40879 764 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 RRADP55042 308 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 FOXK1P85037 733 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 PDAP1Q13442 181 aaKnown RBP17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 GRB7Q14451 532 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 SLC9A5Q14940 896 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 ZNF385CQ66K41 422 aaPredicted RBP17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 UGT3A1Q6NUS8 523 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 MED25Q71SY5 747 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 CEP97Q8IW35 865 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 TMEM102Q8N9M5 508 aaPredicted RBP17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 MAGEC3Q8TD91 643 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 TSNARE1Q96NA8 513 aa17.27■□□□□ 0.36
SQSTM1-204ENST00000453046 MENTQ9BUN1 341 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms