RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SLC29A3Q9BZD2 475 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 ILKAPQ9H0C8 392 aaPredicted RBP12.29□□□□□ -0.44
CHD3-206ENST00000452447 KCNF1Q9H3M0 494 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 PPANQ9NQ55 473 aaKnown RBP12.29□□□□□ -0.44
CHD3-206ENST00000452447 PCYOX1Q9UHG3 505 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 HS3ST3B1Q9Y662 390 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 NBPF19A0A087WUL8 3843 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 CLEC18AA5D8T8 446 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 TXNDC9O14530 226 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 BANF1O75531 89 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 MED26O95402 600 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 ZGLP1P0C6A0 271 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 IMPA1P29218 277 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 UQCRFS1P47985 274 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 KLC1Q07866 573 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 HKDC1Q2TB90 917 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 BBS9Q3SYG4 887 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 PLEKHN1Q494U1 663 aaPredicted RBP12.28□□□□□ -0.44
CHD3-206ENST00000452447 PRR30Q53SZ7 412 aaPredicted RBP12.28□□□□□ -0.44
CHD3-206ENST00000452447 VWA2Q5GFL6 755 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 AGAP7PQ5VUJ5 663 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 GARNL3Q5VVW2 1013 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 ZNF425Q6IV72 752 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 CLEC18BQ6UXF7 455 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 PARP9Q8IXQ6 854 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 PDIK1LQ8N165 341 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 CLEC18CQ8NCF0 446 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 CAPZA3Q96KX2 299 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 AGAP4Q96P64 663 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 CCDC177Q9NQR7 707 aaPredicted RBP12.28□□□□□ -0.44
CHD3-206ENST00000452447 TRPC4Q9UBN4 977 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 C3orf18Q9UK00 162 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 RUVBL1Q9Y265 456 aaKnown RBP12.28□□□□□ -0.44
CHD3-206ENST00000452447 ZGRF1Q86YA3 2104 aa12.28□□□□□ -0.44
CHD3-206ENST00000452447 H7BY64 318 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 ALOX12BO75342 701 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 C8GP07360 202 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 ANXA5P08758 320 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 HRH2P25021 359 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 GNG11P61952 73 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 RELAQ04206 551 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 DSG2Q14126 1118 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 FHL5Q5TD97 284 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 KIAA0408Q6ZU52 694 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 SPNS2Q8IVW8 549 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 KLHL7Q8IXQ5 586 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 MYO1HQ8N1T3 1032 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 OR11G2Q8NGC1 345 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 EEF1AKMT1Q8WVE0 214 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 TRIM44Q96DX7 344 aaPredicted RBP12.27□□□□□ -0.44
CHD3-206ENST00000452447 MMABQ96EY8 250 aaPredicted RBP12.27□□□□□ -0.44
CHD3-206ENST00000452447 CERS2Q96G23 380 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 CCDC138Q96M89 665 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 RUNDC3BQ96NL0 473 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 PRAP1Q96NZ9 151 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 OR2A5Q96R48 311 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 PCBD2Q9H0N5 130 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 POLEQ07864 2286 aa12.27□□□□□ -0.44
CHD3-206ENST00000452447 DIDO1Q9BTC0 2240 aaKnown RBP12.27□□□□□ -0.45
CHD3-206ENST00000452447 PABPN1LA6NDY0 278 aaKnown RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 MAP2K7O14733 419 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 HAT1O14929 419 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 AGFG2O95081 481 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 AHSGP02765 367 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 HIST1H2AGP0C0S8 130 aaPredicted RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 ACPPP15309 386 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 HIST1H2ADP20671 130 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 CXCR2P25025 360 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 DR1Q01658 176 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 SRSF1Q07955 248 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHD3-206ENST00000452447 MORF4L2Q15014 288 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 NDUFA9Q16795 377 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 MSS51Q4VC12 460 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 HP1BP3Q5SSJ5 553 aaPredicted RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 PAQR3Q6TCH7 311 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 SYDE1Q6ZW31 735 aaPredicted RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 PLD3Q8IV08 490 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 CNTN4Q8IWV2 1026 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 LRRC56Q8IYG6 542 aaPredicted RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 THOC3Q96J01 351 aaKnown RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 PDLIM2Q96JY6 352 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 HIST1H2AHQ96KK5 128 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 HIST1H2AJQ99878 128 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 H2AFJQ9BTM1 129 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 LHPPQ9H008 270 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 DRC3Q9H069 523 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 PARVBQ9HBI1 364 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 ZBTB20Q9HC78 741 aaPredicted RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 TMEM184CQ9NVA4 438 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 CUEDC1Q9NWM3 386 aaPredicted RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 UTP20O75691 2785 aaKnown RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 SCN2AQ99250 2005 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 IGLV3-12A0A075B6K2 115 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 TCP11X1B4DZS4 312 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 GABRB3P28472 473 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 EMP2P54851 167 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 TBPL1P62380 186 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 SP140Q13342 867 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 PDAP1Q13442 181 aaKnown RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 FAM53BQ14153 422 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms