RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 CTAGE6Q86UF2 777 aa15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 CCDC25Q86WR0 208 aa15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 CTAGE4Q8IX94 777 aa15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 THAP4Q8WY91 577 aa15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 TM4SF19Q96DZ7 209 aa15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 DERL2Q9GZP9 239 aa15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 CAB39LQ9H9S4 337 aa15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 CCDC177Q9NQR7 707 aaPredicted RBP15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 NINJ2Q9NZG7 142 aa15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 POLHQ9Y253 713 aa15.38■□□□□ 0.05
SCAMP4-205ENST00000452128 CDC14CA4D256 554 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 VSTM2BA6NLU5 285 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 LCMT2O60294 686 aaKnown RBP15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 ALBP02768 609 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 SAT1P21673 171 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 KCNC1P48547 511 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 PMS2P54278 862 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 NAB1Q13506 487 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 EFTUD2Q15029 972 aaKnown RBP eCLIP15.37■□□□□ 0.057e-12■■■■■ 65.8
SCAMP4-205ENST00000452128 FAM214AQ32MH5 1076 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 PRAMEF13Q5VWM6 474 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 PLD3Q8IV08 490 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 OR2Y1Q8NGV0 311 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 CDKL2Q92772 493 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 FKBP10Q96AY3 582 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 C17orf62Q9BQA9 187 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 MLXIPLQ9NP71 852 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 ARL15Q9NXU5 204 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 OARD1Q9Y530 152 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 ANKRD12Q6UB98 2062 aa15.37■□□□□ 0.05
SCAMP4-205ENST00000452128 IGLV3-12A0A075B6K2 115 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 P2RX6O15547 441 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 PHGDHO43175 533 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 FOXS1O43638 330 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 HIST1H2AGP0C0S8 130 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 SFTPCP11686 197 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 HIST1H2ADP20671 130 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 ALAS2P22557 587 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 CCND1P24385 295 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 STX2P32856 288 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 GMPRP36959 345 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 DLG1Q12959 904 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 KCNAB2Q13303 367 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 USP10Q14694 798 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 SSPNQ14714 243 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 TSNQ15631 228 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 HKDC1Q2TB90 917 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 SPATA6LQ8N4H0 392 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 PPM1NQ8N819 430 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 PYCR2Q96C36 320 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 HIST1H2AHQ96KK5 128 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 SPSB2Q99619 263 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 HIST1H2AJQ99878 128 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 H2AFJQ9BTM1 129 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 TRIM55Q9BYV6 548 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 GPAMQ9HCL2 828 aa15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 IFT80Q9P2H3 777 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 RUVBL1Q9Y265 456 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-205ENST00000452128 NPEPPSL1A6NEC2 478 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 C9J4A7 227 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 K7EM74 188 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 CEACAM4O75871 244 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 CD63P08962 238 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 SLC35E2BP0CK96 405 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 CD1DP15813 335 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 SPRP35270 261 aaPredicted RBP15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 GGT5P36269 586 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 OR1D4P47884 311 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 SLC6A12P48065 614 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 TSTA3Q13630 321 aaPredicted RBP15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 NKG7Q16617 165 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 GARNL3Q5VVW2 1013 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 MLIPQ5VWP3 458 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 CAPN13Q6MZZ7 669 aaPredicted RBP15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 CSNK1A1LQ8N752 337 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 LRRN4CLQ8ND94 238 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 ATL1Q8WXF7 558 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 PTERQ96BW5 349 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 RHBDF1Q96CC6 855 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 THAP11Q96EK4 314 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 ABHD17AQ96GS6 310 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 HAUS8Q9BT25 410 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 TRIM54Q9BYV2 358 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 SLC7A5P2Q9GIP4 190 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 SLC25A18Q9H1K4 315 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 ACSS3Q9H6R3 686 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 WDR54Q9H977 334 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 TXLNGQ9NUQ3 528 aa15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 UTP6Q9NYH9 597 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 MRPS2Q9Y399 296 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-205ENST00000452128 MDC1Q14676 2089 aaKnown RBP15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 B8ZZF3 427 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 TAPBPO15533 448 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 CCDC166P0CW27 439 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 CDH1P12830 882 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 STMN1P16949 149 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 SLC26A3P40879 764 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 BCL6P41182 706 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 RAB10P61026 200 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms