RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 CD97P48960 835 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 CARSP49589 748 aaKnown RBP8.28□□□□□ -1.08
RFX3-209ENST00000451859 PGGT1BP53609 377 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 ARF3P61204 181 aaPredicted RBP8.28□□□□□ -1.08
RFX3-209ENST00000451859 RBBP7Q16576 425 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 HKDC1Q2TB90 917 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 RBM20Q5T481 1227 aaKnown RBP8.28□□□□□ -1.08
RFX3-209ENST00000451859 ICE2Q659A1 982 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 SLC6A19Q695T7 634 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 MBOAT1Q6ZNC8 495 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 RNF44Q7L0R7 432 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 OVCH1Q7RTY7 1134 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 IGDCC3Q8IVU1 814 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 CSNK1A1LQ8N752 337 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 KCNJ9Q92806 393 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 FKBP10Q96AY3 582 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 FER1L6-AS2Q96M78 137 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 ZFYVE21Q9BQ24 234 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 MESP1Q9BRJ9 268 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 TRIM51Q9BSJ1 452 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 AARSD1Q9BTE6 412 aaKnown RBP8.28□□□□□ -1.08
RFX3-209ENST00000451859 TRIM31Q9BZY9 425 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 SYNPO2LQ9H987 977 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 MLXIPLQ9NP71 852 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 CUEDC1Q9NWM3 386 aaPredicted RBP8.28□□□□□ -1.08
RFX3-209ENST00000451859 PCYOX1Q9UHG3 505 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 FBXL4Q9UKA2 621 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 DHRS7Q9Y394 339 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 USP9XQ93008 2570 aaPredicted RBP8.27□□□□□ -1.08
RFX3-209ENST00000451859 SPTAN1Q13813 2472 aaKnown RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 IGKV1-8A0A0C4DH67 115 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 OR2A25A4D2G3 310 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 ZNF839A8K0R7 811 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 E7ENX8 843 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 AGPSO00116 658 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 CES2O00748 559 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 HAT1O14929 419 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 TTI1O43156 1089 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 SRPX2O60687 465 aaPredicted RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 VPS4BO75351 444 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 CCNDBP1O95273 360 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 MPC1LP0DKB6 136 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 ERGP11308 486 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 ENO3P13929 434 aaPredicted RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 GNLYP22749 145 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 MMP11P24347 488 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 IMPA1P29218 277 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 CDKN2DP55273 166 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 MRPS25P82663 173 aaKnown RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 TAP2Q03519 686 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 MYBPC3Q14896 1274 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 ARHGAP19Q14CB8 494 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 MUM1Q2TAK8 710 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 FAM214AQ32MH5 1076 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 SPANXN3Q5MJ09 141 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 VWA5B1Q5TIE3 1220 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 YOD1Q5VVQ6 348 aaPredicted RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 ARMC3Q5W041 872 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 PAPD7Q5XG87 772 aaKnown RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 FAAH2Q6GMR7 532 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 JMJD6Q6NYC1 403 aaPredicted RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 NEK10Q6ZWH5 1172 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 PAQR7Q86WK9 346 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 ANKMY2Q8IV38 441 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 PARP9Q8IXQ6 854 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 PALM2Q8IXS6 379 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 LMNTD2Q8IXW0 634 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 RBMXL3Q8N7X1 1067 aaKnown RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 GPATCH11Q8N954 259 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 C2CD4AQ8NCU7 369 aaPredicted RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 EEF1AKMT1Q8WVE0 214 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 ANP32BQ92688 251 aaKnown RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 RERGQ96A58 199 aaPredicted RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 MIEF2Q96C03 454 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 C8orf44Q96CB5 159 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 LINGO1Q96FE5 620 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 C10orf90Q96M02 699 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 ZNF285Q96NJ3 590 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 IP6K3Q96PC2 410 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 EBNA1BP2Q99848 306 aaKnown RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 PLCD4Q9BRC7 762 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 CRB3Q9BUF7 120 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 ZBTB20Q9HC78 741 aaPredicted RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 ZNF304Q9HCX3 659 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 ADAMTS6Q9UKP5 1117 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 PYCARDQ9ULZ3 195 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 VPS4AQ9UN37 437 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 RUVBL1Q9Y265 456 aaKnown RBP8.27□□□□□ -1.09
RFX3-209ENST00000451859 HS3ST3B1Q9Y662 390 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 COMMD10Q9Y6G5 202 aa8.27□□□□□ -1.09
RFX3-209ENST00000451859 A0A0A6YYC8 382 aaPredicted RBP8.26□□□□□ -1.09
RFX3-209ENST00000451859 FITM1A5D6W6 292 aa8.26□□□□□ -1.09
RFX3-209ENST00000451859 PABPN1LA6NDY0 278 aaKnown RBP8.26□□□□□ -1.09
RFX3-209ENST00000451859 CYSRT1A8MQ03 144 aa8.26□□□□□ -1.09
RFX3-209ENST00000451859 H7BY64 318 aa8.26□□□□□ -1.09
RFX3-209ENST00000451859 I3L1I5 382 aaPredicted RBP8.26□□□□□ -1.09
RFX3-209ENST00000451859 GFYI3L273 518 aa8.26□□□□□ -1.09
RFX3-209ENST00000451859 SOCS6O14544 535 aa8.26□□□□□ -1.09
RFX3-209ENST00000451859 MAP2K7O14733 419 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms