RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 HIBCHQ6NVY1 386 aaPredicted RBP14.56□□□□□ -0.08
CHD3-205ENST00000449744 PAQR3Q6TCH7 311 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 IGDCC3Q8IVU1 814 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 PRSS58Q8IYP2 241 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 RBMXL3Q8N7X1 1067 aaKnown RBP14.56□□□□□ -0.08
CHD3-205ENST00000449744 GPATCH11Q8N954 259 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 STT3BQ8TCJ2 826 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 PNPLA2Q96AD5 504 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 ALKBH8Q96BT7 664 aaKnown RBP14.56□□□□□ -0.08
CHD3-205ENST00000449744 LRRC39Q96DD0 335 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 MVB12AQ96EY5 273 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 LINGO1Q96FE5 620 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 HIST1H2AHQ96KK5 128 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 C10orf90Q96M02 699 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 OR2A5Q96R48 311 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 HIST1H2AJQ99878 128 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 TRIM51Q9BSJ1 452 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 H2AFJQ9BTM1 129 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 TRIM31Q9BZY9 425 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 PCBD2Q9H0N5 130 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 ZNF552Q9H707 407 aaPredicted RBP14.56□□□□□ -0.08
CHD3-205ENST00000449744 MAP10Q9P2G4 905 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 PDE10AQ9Y233 779 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 RUVBL1Q9Y265 456 aaKnown RBP14.56□□□□□ -0.08
CHD3-205ENST00000449744 HS3ST3B1Q9Y662 390 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 ANKRD12Q6UB98 2062 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 EFCAB8A8MWE9 144 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 H7BY64 318 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 SOCS6O14544 535 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 HAT1O14929 419 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 ANXA5P08758 320 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 ZGLP1P0C6A0 271 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 GABRB3P28472 473 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 CDKN2DP55273 166 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 SOX8P57073 446 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 TBPL1P62380 186 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 RELAQ04206 551 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 KLC1Q07866 573 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 UBAP2LQ14157 1087 aaKnown RBP14.55□□□□□ -0.08
CHD3-205ENST00000449744 NDUFA9Q16795 377 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 HKDC1Q2TB90 917 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 TEDDM1Q5T9Z0 273 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 GALNT7Q86SF2 657 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 LRRC56Q8IYG6 542 aaPredicted RBP14.55□□□□□ -0.08
CHD3-205ENST00000449744 ZADH2Q8N4Q0 377 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 MMABQ96EY8 250 aaPredicted RBP14.55□□□□□ -0.08
CHD3-205ENST00000449744 SNF8Q96H20 258 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 PDLIM2Q96JY6 352 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 PWWP2AQ96N64 755 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 PRAP1Q96NZ9 151 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 TRIM54Q9BYV2 358 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 PARVBQ9HBI1 364 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 TMEM184CQ9NVA4 438 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 CUEDC1Q9NWM3 386 aaPredicted RBP14.55□□□□□ -0.08
CHD3-205ENST00000449744 SLC17A6Q9P2U8 582 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 TRPC4Q9UBN4 977 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 RNF14Q9UBS8 474 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 C3orf18Q9UK00 162 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 ADAMTS6Q9UKP5 1117 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 CORO1CQ9ULV4 474 aaPredicted RBP14.55□□□□□ -0.08
CHD3-205ENST00000449744 PYCARDQ9ULZ3 195 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 MAP4K5Q9Y4K4 846 aa14.55□□□□□ -0.08
CHD3-205ENST00000449744 NDC80O14777 642 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 ALOX12BO75342 701 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 SEC31AO94979 1220 aaKnown RBP14.54□□□□□ -0.08
CHD3-205ENST00000449744 CCND1P24385 295 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 VARSP26640 1264 aaKnown RBP14.54□□□□□ -0.08
CHD3-205ENST00000449744 IL2P60568 153 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 TIAL1Q01085 375 aaKnown RBP eCLIP14.54□□□□□ -0.08
CHD3-205ENST00000449744 DSG2Q14126 1118 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 INPP5JQ15735 1006 aaPredicted RBP14.54□□□□□ -0.08
CHD3-205ENST00000449744 VWA2Q5GFL6 755 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 HECTD2Q5U5R9 776 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 FAM45BPQ6NSW5 357 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 AGTRAPQ6RW13 159 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 KIRREL2Q6UWL6 708 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 C17orf64Q86WR6 236 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 PLD3Q8IV08 490 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 ANKMY2Q8IV38 441 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 PARP9Q8IXQ6 854 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 GALNT11Q8NCW6 608 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 FAM45AQ8TCE6 357 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 KRT12Q99456 494 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 ATG10Q9H0Y0 220 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 ZFATQ9P243 1243 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 VWA7Q9Y334 891 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 TEX264Q9Y6I9 313 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 BSNQ9UPA5 3926 aa14.54□□□□□ -0.08
CHD3-205ENST00000449744 MAP2K7O14733 419 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 ACPPP15309 386 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 CXCR2P25025 360 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 AVPR1BP47901 424 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 EMP2P54851 167 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 RPS15AP62244 130 aaKnown RBP14.53□□□□□ -0.08
CHD3-205ENST00000449744 PDIA2Q13087 525 aaKnown RBP14.53□□□□□ -0.08
CHD3-205ENST00000449744 NAE1Q13564 534 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 STEAP4Q687X5 459 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 TRMT10BQ6PF06 316 aaKnown RBP14.53□□□□□ -0.08
CHD3-205ENST00000449744 IGFL3Q6UXB1 125 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 MBOAT1Q6ZNC8 495 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms