RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 CBSP35520 551 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 CDKN1CP49918 316 aaPredicted RBP6.96□□□□□ -1.3
BEST1-202ENST00000449131 MYBPC1Q00872 1141 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 LY6G5CQ5SRR4 150 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 MMAAQ8IVH4 418 aaKnown RBP6.96□□□□□ -1.3
BEST1-202ENST00000449131 ARHGAP12Q8IWW6 846 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 OLIG1Q8TAK6 271 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 AP3S1Q92572 193 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 PTERQ96BW5 349 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 COL21A1Q96P44 957 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 ZNF347Q96SE7 839 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 PKP4Q99569 1192 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 ZSCAN5AQ9BUG6 496 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 POLR2J3Q9H1A7 115 aaKnown RBP6.96□□□□□ -1.3
BEST1-202ENST00000449131 MAGEE1Q9HCI5 957 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 SMOXQ9NWM0 555 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 EURLQ9NYK6 297 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 PTBP2Q9UKA9 531 aaKnown RBP6.96□□□□□ -1.3
BEST1-202ENST00000449131 SATB2Q9UPW6 733 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 WBP11Q9Y2W2 641 aaKnown RBP6.96□□□□□ -1.3
BEST1-202ENST00000449131 PCDHGB5Q9Y5G0 923 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 SPO11Q9Y5K1 396 aa6.96□□□□□ -1.3
BEST1-202ENST00000449131 PRSS51A0A1B0GVH4 220 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 M0QZQ0 153 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 LSM1O15116 133 aaKnown RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 IDH3BO43837 385 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 SNX4O95219 450 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 NPPAP01160 153 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 SOD2P04179 222 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 TFAP2AP05549 437 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 SAGP10523 405 aaPredicted RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 TYRP14679 529 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 CD1EP15812 388 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 KELP23276 732 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 VIPR1P32241 457 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 HTR6P50406 440 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 TARDBPQ13148 414 aaKnown RBP eCLIP6.95□□□□□ -1.3
BEST1-202ENST00000449131 KCNAB2Q13303 367 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 ABRAXAS2Q15018 415 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 NEK5Q6P3R8 708 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 MINDY1Q8N5J2 469 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 ZCCHC10Q8TBK6 192 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 LCN9Q8WX39 176 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 NUS1Q96E22 293 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 ZBED6CLQ96FA7 236 aaPredicted RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 DIRAS2Q96HU8 199 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 HSH2DQ96JZ2 352 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 ZNF514Q96K75 400 aaPredicted RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 SLC35G5Q96KT7 338 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 CCM2Q9BSQ5 444 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 YIPF4Q9BSR8 244 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 CNPPD1Q9BV87 410 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 TDP1Q9NUW8 608 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 TRPS1Q9UHF7 1281 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 HMX2A2RU54 273 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 NME4O00746 187 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 ZNF12P17014 697 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 CD247P20963 164 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 FPR1P21462 350 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 NT5EP21589 574 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 CLCN4P51793 760 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 RPS13P62277 151 aaKnown RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 TIGD6Q17RP2 521 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 FAM91A1Q658Y4 838 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 SHQ1Q6PI26 577 aaKnown RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 KDELC1Q6UW63 502 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 SUSD1Q6UWL2 747 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 VITQ6UXI7 678 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 DPY19L3Q6ZPD9 716 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 FAM92BQ6ZTR7 304 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 USP30Q70CQ3 517 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 MAVSQ7Z434 540 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 MRPL10Q7Z7H8 261 aaKnown RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 FAM129CQ86XR2 697 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 HS3ST5Q8IZT8 346 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 LILRA2Q8N149 483 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 CPA6Q8N4T0 437 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 OR4K1Q8NGD4 311 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 ISOC1Q96CN7 298 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 SMIM14Q96QK8 99 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 IL36AQ9UHA7 158 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 PHF24Q9UPV7 400 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 TMED5Q9Y3A6 229 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 A0A0J9YVX5 310 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 A0A1B0GW55 424 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 LEFTY2O00292 366 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 PITPNM1O00562 1244 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 MMP20O60882 483 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 HIST1H2ABP04908 130 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 RPLP0P05388 317 aaKnown RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 C8BP07358 591 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 DUX4L2P0CJ85 424 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 DUX4L3P0CJ86 424 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 DUX4L4P0CJ87 422 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 DUX4L5P0CJ88 424 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 DUX4L6P0CJ89 424 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 DUX4L7P0CJ90 424 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 BCKDHAP12694 445 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 ACP5P13686 325 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms