RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RACGAP1Q9H0H5 632 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 TKTL2Q9H0I9 626 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 MCCC2Q9HCC0 563 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 GALNT9Q9HCQ5 603 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF219Q9P2Y4 722 aaPredicted RBP9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 EIF2B4Q9UI10 523 aaKnown RBP9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 SCML1Q9UN30 329 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 ING4Q9UNL4 249 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 MRPL42Q9Y6G3 142 aaKnown RBP9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 FNDC1Q4ZHG4 1894 aaPredicted RBP9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 FABP7O15540 132 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 NDUFA2O43678 99 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ATG13O75143 517 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 TRIQKQ629K1 86 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 SLC44A2Q8IWA5 706 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 RNF34Q969K3 372 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 TBATAQ96M53 351 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 PPP1R2P1Q96PQ5 205 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ELOVL6Q9H5J4 265 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF277Q9NRM2 450 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 RIMKLBQ9ULI2 386 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 DIMT1Q9UNQ2 313 aaKnown RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 SCN9AQ15858 1988 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 E9PAM4 449 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 RHOBTB1O94844 696 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 CCNDBP1O95273 360 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 GLP2RO95838 553 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ARSBP15848 533 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 CXCR3P49682 368 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ERVPABLB-1P60509 514 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 TIAL1Q01085 375 aaKnown RBP eCLIP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ITKQ08881 620 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 LARS2Q15031 903 aaKnown RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 SSX1Q16384 188 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 FAM98CQ17RN3 349 aaKnown RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 VTCN1Q7Z7D3 282 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 TTC16Q8NEE8 873 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 WDR36Q8NI36 951 aaKnown RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 GPR137Q96N19 417 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 SLC2A13Q96QE2 648 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 SIK2Q9H0K1 926 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 IMPAD1Q9NX62 359 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 MGAT4AQ9UM21 535 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 KCTD3Q9Y597 815 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 UBR3Q6ZT12 1888 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ARPC4-TTLL3A0A0A6YYG9 625 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 A0A1W2PQL4 384 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 FZD9O00144 591 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 BTN3A1O00481 513 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 CLDN5O00501 218 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 MATN3O15232 486 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 PROM1O43490 865 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 CA12O43570 354 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ORC5O43913 435 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ICAM3P32942 547 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 MAN2A2P49641 1150 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 RAB14P61106 215 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 UBE3AQ05086 875 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF33AQ06730 810 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 LRRC66Q68CR7 880 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 FAHD1Q6P587 224 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 CFAP77Q6ZQR2 320 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 MILR1Q7Z6M3 343 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 GALNT10Q86SR1 603 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 CRYBG2Q8N1P7 616 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF366Q8N895 744 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 BTN2A2Q8WVV5 523 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 COLEC11Q9BWP8 271 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 NXF3Q9H4D5 531 aaKnown RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 SLC6A13Q9NSD5 602 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 RBFOX1Q9NWB1 397 aaKnown RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 MS4A12Q9NXJ0 267 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 DUSP12Q9UNI6 340 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 IGKV6-21A0A0C4DH24 114 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 NPEPPSL1A6NEC2 478 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 PPM1BO75688 479 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 C9P02748 559 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 TGFB3P10600 412 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 PRKAR1AP10644 381 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 HOXB8P17481 243 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ARF4P18085 180 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 KCNC3Q14003 757 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 NFE2L1Q14494 772 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 FGFBP1Q14512 234 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 HKDC1Q2TB90 917 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 C19orf48Q6RUI8 117 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 B3GNT7Q8NFL0 401 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 GPR152Q8TDT2 470 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 FAM129BQ96TA1 746 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 CD274Q9NZQ7 290 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 VPS9D1Q9Y2B5 631 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF451Q9Y4E5 1061 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 NRXN2Q9P2S2 1712 aa9.14□□□□□ -0.95
SYNPO2-204ENST00000448416 XIRP1Q702N8 1843 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 BEST1O76090 585 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 RAF1P04049 648 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 CYP17A1P05093 508 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 IL6P05231 212 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 NPR1P16066 1061 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms