RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CFL2Q9Y281 166 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 PCDHGB2Q9Y5G2 931 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 V9GYH0 126 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 MOXD2PA6NHM9 499 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 RFXANKO14593 260 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 NBNO60934 754 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 ERN1O75460 977 aaKnown RBP13.54□□□□□ -0.24
VPS52-212ENST00000445902 UGT2B17O75795 530 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 HLA-DPA1P20036 260 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 MC4RP32245 332 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 TIE1P35590 1138 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 USP39Q53GS9 565 aaKnown RBP13.54□□□□□ -0.24
VPS52-212ENST00000445902 OR4F3Q6IEY1 312 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 TMPRSS11AQ6ZMR5 421 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 SCD5Q86SK9 330 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 UMODL1-AS1Q8N2C9 162 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 CAMKK1Q8N5S9 505 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 TRPM4Q8TD43 1214 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 COL21A1Q96P44 957 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 MGLLQ99685 303 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 RTP3Q9BQQ7 232 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 DYRK4Q9NR20 520 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 ABCC13Q9NSE7 274 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 MS4A12Q9NXJ0 267 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 TREHO43280 583 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 AOC2O75106 756 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 TSC22D2O75157 780 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 GLUD1P00367 558 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 MYL9P24844 172 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 WEE1P30291 646 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 SOX3P41225 446 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 ABHD18Q0P651 414 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 C19orf57Q0VDD7 668 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 HYAL2Q12891 473 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 CPSF6Q16630 551 aaKnown RBP eCLIP13.53□□□□□ -0.24
VPS52-212ENST00000445902 TIGD5Q53EQ6 642 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 XKR4Q5GH76 650 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 FAHD1Q6P587 224 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 MBOAT1Q6ZNC8 495 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 PRR23CQ6ZRP0 262 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 ZSWIM9Q86XI8 627 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 YIPF7Q8N8F6 280 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 ANGPTL6Q8NI99 470 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 RIPOR3Q96MK2 946 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 VPS35Q96QK1 796 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 DHRS9Q9BPW9 319 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 ASPNQ9BXN1 380 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 ZYG11BQ9C0D3 744 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 CSNK1G1Q9HCP0 422 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 PIKFYVEQ9Y2I7 2098 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 FFAR2O15552 330 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 IL12RB1P42701 662 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 BRCC3P46736 316 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 ZNF140P52738 457 aaPredicted RBP13.53□□□□□ -0.24
VPS52-212ENST00000445902 SLC39A12Q504Y0 691 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 NADSYN1Q6IA69 706 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 AFTPHQ6ULP2 937 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 DPY19L3Q6ZPD9 716 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 PAF1Q8N7H5 531 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 ZNF557Q8N988 423 aaPredicted RBP13.53□□□□□ -0.24
VPS52-212ENST00000445902 B3GNT7Q8NFL0 401 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 CDC26Q8NHZ8 85 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 CCDC120Q96HB5 630 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 C11orf54Q9H0W9 315 aaPredicted RBP13.53□□□□□ -0.24
VPS52-212ENST00000445902 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 NLE1Q9NVX2 485 aaPredicted RBP13.53□□□□□ -0.24
VPS52-212ENST00000445902 PPT2Q9UMR5 302 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 WNT9AO14904 365 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 C9P02748 559 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 ESR1P03372 595 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 CHRM5P08912 532 aaPredicted RBP13.53□□□□□ -0.24
VPS52-212ENST00000445902 PTPN6P29350 595 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 KDELR2P33947 212 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 GGT2P36268 569 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 RPS14P62263 151 aaKnown RBP13.53□□□□□ -0.24
VPS52-212ENST00000445902 FCHO2Q0JRZ9 810 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 BTBD16Q32M84 506 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 OVOS1Q6IE37 1185 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 SCN4BQ8IWT1 228 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 DEDD2Q8WXF8 326 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 CCM2Q9BSQ5 444 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 ELP3Q9H9T3 547 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 ZNF226Q9NYT6 803 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 NUDT4Q9NZJ9 180 aa13.53□□□□□ -0.24
VPS52-212ENST00000445902 PATJQ8NI35 1801 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 LOC730098B7Z3J9 87 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 SLC25A27O95847 323 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 TBX18O95935 607 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 ENGP17813 658 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 CASP9P55211 416 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 SSX1Q16384 188 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 MS4A13Q5J8X5 152 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 SBSNQ6UWP8 590 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 FAM131AQ6UXB0 335 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 MIB1Q86YT6 1006 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 SLC5A8Q8N695 610 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 FLCNQ8NFG4 579 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 OR4M1Q8NGD0 313 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 WDR36Q8NI36 951 aaKnown RBP13.52□□□□□ -0.24
VPS52-212ENST00000445902 ULK4Q96C45 1275 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms