RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 RELTQ969Z4 430 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 MAGEB10Q96LZ2 347 aaPredicted RBP13.13□□□□□ -0.31
PTPRE-203ENST00000442830 TUBB6Q9BUF5 446 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 YIPF2Q9BWQ6 316 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 FAM129AQ9BZQ8 928 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 CCDC68Q9H2F9 335 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 SAMD15Q9P1V8 674 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 ABI3Q9P2A4 366 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 KLF2Q9Y5W3 355 aaPredicted RBP13.13□□□□□ -0.31
PTPRE-203ENST00000442830 COMMD10Q9Y6G5 202 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 CROCCQ5TZA2 2017 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 LRBAP50851 2863 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 MAGEB16A2A368 324 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 CDK2AP1O14519 115 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 KLHL18O94889 574 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 NMBRP28336 390 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 TNFRSF8P28908 595 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 FMO4P31512 558 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 AVPR1BP47901 424 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 PNLIPRP1P54315 467 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 CASP6P55212 293 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 ART3Q13508 389 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 VWA2Q5GFL6 755 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 MEI1Q5TIA1 1274 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 ABHD17BQ5VST6 288 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 ICE2Q659A1 982 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 ZNF324BQ6AW86 544 aaPredicted RBP13.12□□□□□ -0.31
PTPRE-203ENST00000442830 ZNF425Q6IV72 752 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 LRRC8EQ6NSJ5 796 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 FBXO42Q6P3S6 717 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 RPTNQ6XPR3 784 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 PAQR7Q86WK9 346 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 LMNTD2Q8IXW0 634 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 PRSS58Q8IYP2 241 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 BRIX1Q8TDN6 353 aaKnown RBP13.12□□□□□ -0.31
PTPRE-203ENST00000442830 MARVELD3Q96A59 401 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 MMABQ96EY8 250 aaPredicted RBP13.12□□□□□ -0.31
PTPRE-203ENST00000442830 DESI2Q9BSY9 194 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 ACAT2Q9BWD1 397 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTPRE-203ENST00000442830 ZNF700Q9H0M5 742 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 PTGFRNQ9P2B2 879 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 COPG2Q9UBF2 871 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 RUVBL1Q9Y265 456 aaKnown RBP13.12□□□□□ -0.31
PTPRE-203ENST00000442830 PCDHGB6Q9Y5F9 930 aa13.12□□□□□ -0.31
PTPRE-203ENST00000442830 ARHGEF33A8MVX0 844 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 H0YIG0 161 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 EIF3FO00303 357 aaPredicted RBP13.11□□□□□ -0.31
PTPRE-203ENST00000442830 KIF5CO60282 957 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 RASAL1O95294 804 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 MPC1LP0DKB6 136 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 ETS1P14921 441 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 TDGF1P3P51864 188 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 CRADDP78560 199 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 KLHL38Q2WGJ6 581 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 CCSMST1Q4G0I0 132 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 TMEM205Q6UW68 189 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 CILP2Q8IUL8 1156 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 GABPB2Q8TAK5 448 aaPredicted RBP13.11□□□□□ -0.31
PTPRE-203ENST00000442830 CALML6Q8TD86 181 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 KCNJ9Q92806 393 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 C8orf44Q96CB5 159 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 THAP11Q96EK4 314 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 MFSD3Q96ES6 412 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 OR2A5Q96R48 311 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 PCBD2Q9H0N5 130 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 CHST11Q9NPF2 352 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 SYBUQ9NX95 663 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 TAC3Q9UHF0 121 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 GUCA1BQ9UMX6 200 aa13.11□□□□□ -0.31
PTPRE-203ENST00000442830 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.1□□□□□ -0.31
PTPRE-203ENST00000442830 OR5H15A6NDH6 313 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 PRSS44E7EML9 344 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 ZBTB14O43829 449 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 ZG16O60844 167 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 NIPSNAP2O75323 286 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 MED26O95402 600 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 ZSCAN5DPP0CG00 497 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 C8orf89P0DMQ9 161 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 MLNP12872 115 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 ELAVL4P26378 380 aaKnown RBP13.1□□□□□ -0.31
PTPRE-203ENST00000442830 MGAT1P26572 445 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 ARNTP27540 789 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 PTGER4P35408 488 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 AGTR2P50052 363 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 RPS15AP62244 130 aaKnown RBP13.1□□□□□ -0.31
PTPRE-203ENST00000442830 EEF1A2Q05639 463 aaKnown RBP13.1□□□□□ -0.31
PTPRE-203ENST00000442830 TSTA3Q13630 321 aaPredicted RBP13.1□□□□□ -0.31
PTPRE-203ENST00000442830 THOC5Q13769 683 aaKnown RBP13.1□□□□□ -0.31
PTPRE-203ENST00000442830 FASTKQ14296 549 aaKnown RBP13.1□□□□□ -0.31
PTPRE-203ENST00000442830 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.1□□□□□ -0.31
PTPRE-203ENST00000442830 NEPROQ6NW34 567 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 SUSD1Q6UWL2 747 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 TMEM207Q6UWW9 146 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 GFRALQ6UXV0 394 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 FJX1Q86VR8 437 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 TMEM151BQ8IW70 566 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 ZNF808Q8N4W9 903 aaPredicted RBP13.1□□□□□ -0.31
PTPRE-203ENST00000442830 AMER3Q8N944 861 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 CATSPER1Q8NEC5 780 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms