RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 IDSB3KWA1 339 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 PGRMC1O00264 195 aaKnown RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 SLC16A8O95907 504 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 SLC1A2P43004 574 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 AVPR1BP47901 424 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 RGS4P49798 205 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 CLCN7P51798 805 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 PER3P56645 1201 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 ARG2P78540 354 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 EEF1A2Q05639 463 aaKnown RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 PRDX1Q06830 199 aaKnown RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 MFAP5Q13361 173 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 CUL1Q13616 776 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 CRB2Q5IJ48 1285 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 ANKRD22Q5VYY1 191 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 CCDC137Q6PK04 289 aaKnown RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 IGFL2Q6UWQ7 119 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 NDUFAF7Q7L592 441 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 MAMDC2Q7Z304 686 aaPredicted RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 CAND1Q86VP6 1230 aaKnown RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 DTWD1Q8N5C7 304 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 FBXO15Q8NCQ5 510 aaPredicted RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 PPFIBP2Q8ND30 876 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 MCUQ8NE86 351 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 MCOLN3Q8TDD5 553 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 C8orf44Q96CB5 159 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 MAGEB10Q96LZ2 347 aaPredicted RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 SERPINB12Q96P63 405 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 CCDC177Q9NQR7 707 aaPredicted RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 RIC8BQ9NVN3 520 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 GALPQ9UBC7 116 aa11.21□□□□□ -0.61
TTC28-203ENST00000442232 TRMT6Q9UJA5 497 aaKnown RBP11.21□□□□□ -0.61
TTC28-203ENST00000442232 IGLV3-12A0A075B6K2 115 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 EIF3FO00303 357 aaPredicted RBP11.2□□□□□ -0.62
TTC28-203ENST00000442232 HAT1O14929 419 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 KIF5CO60282 957 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 WFS1O76024 890 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 HRH2P25021 359 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 COILP38432 576 aaPredicted RBP11.2□□□□□ -0.62
TTC28-203ENST00000442232 YBX1P67809 324 aaKnown RBP11.2□□□□□ -0.62
TTC28-203ENST00000442232 CTBP1Q13363 440 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 PTK6Q13882 451 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 PPP1R7Q15435 360 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 HKDC1Q2TB90 917 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 VWA2Q5GFL6 755 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 MFSD4BQ5TF39 518 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 FBXO42Q6P3S6 717 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 TTC27Q6P3X3 843 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 UBE2R2Q712K3 238 aaPredicted RBP11.2□□□□□ -0.62
TTC28-203ENST00000442232 KCNMB4Q86W47 210 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 DENND6AQ8IWF6 608 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.2□□□□□ -0.62
TTC28-203ENST00000442232 ZNF480Q8WV37 535 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 METTL21AQ8WXB1 218 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 ASB11Q8WXH4 323 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 LMF1Q96S06 567 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 GPR21Q99679 349 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 TRIM56Q9BRZ2 755 aaKnown RBP11.2□□□□□ -0.62
TTC28-203ENST00000442232 PCBD2Q9H0N5 130 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 PTGFRNQ9P2B2 879 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 ERRFI1Q9UJM3 462 aaPredicted RBP11.2□□□□□ -0.62
TTC28-203ENST00000442232 DHRS7Q9Y394 339 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 CSAG2Q9Y5P2 127 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 SVILO95425 2214 aa11.2□□□□□ -0.62
TTC28-203ENST00000442232 DOPEY1Q5JWR5 2465 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 A0A0A6YYC8 382 aaPredicted RBP11.19□□□□□ -0.62
TTC28-203ENST00000442232 E7ENX8 843 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 I3L1I5 382 aaPredicted RBP11.19□□□□□ -0.62
TTC28-203ENST00000442232 MED26O95402 600 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 LDLRP01130 860 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 SERPINA7P05543 415 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 PRR35P0CG20 571 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 MYBL2P10244 700 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 COX6A1P12074 109 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 ICAM2P13598 275 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 EDN3P14138 238 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 GRK3P35626 688 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 RPS15AP62244 130 aaKnown RBP11.19□□□□□ -0.62
TTC28-203ENST00000442232 CCZ1BP86790 482 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 CCZ1P86791 482 aaPredicted RBP11.19□□□□□ -0.62
TTC28-203ENST00000442232 TAP2Q03519 686 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 RELAQ04206 551 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 Q0VFX4 171 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 KCTD19Q17RG1 926 aaPredicted RBP11.19□□□□□ -0.62
TTC28-203ENST00000442232 ATG9BQ674R7 924 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 HIST2H2BCQ6DN03 193 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 FAAH2Q6GMR7 532 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 ZNF425Q6IV72 752 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 RIPOR1Q6ZS17 1223 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 PPIL6Q8IXY8 311 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 CPNE9Q8IYJ1 553 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 MYO1HQ8N1T3 1032 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 RASGEF1CQ8N431 466 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 BCORP1Q8N888 145 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 OR1N1Q8NGS0 311 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 GIMAP7Q8NHV1 300 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 SUN3Q8TAQ9 357 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 CD200R1Q8TD46 325 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 BRIX1Q8TDN6 353 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms