RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CBX6O95503 412 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 HGFP14210 728 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 IMPA1P29218 277 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 CXCL12P48061 93 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 MTAPQ13126 283 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 UBAP2LQ14157 1087 aaKnown RBP7.83□□□□□ -1.16
CCDC39-201ENST00000442201 Q6ZSR6 202 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 ABI3BPQ7Z7G0 1075 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 SLC38A6Q8IZM9 456 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 FRMD1Q8N878 549 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 PCYOX1LQ8NBM8 494 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 SNX19Q92543 992 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 MED8Q96G25 268 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 PDXPQ96GD0 296 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 PSD2Q9BQI7 771 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 CCDC106Q9BWC9 280 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 MRGBPQ9NV56 204 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 KLQ9UEF7 1012 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 FAF1Q9UNN5 650 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-201ENST00000442201 A0A1W2PPC4 97 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 PDZK1P1A8MUH7 402 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 PRR5-ARHGAP8B1AHC4 643 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 SLC22A1O15245 554 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 SH3BP5O60239 455 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 VPS4BO75351 444 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 CLDN9O95484 217 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 CRYZL1O95825 349 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 DCNP07585 359 aaKnown RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 LINC00032P0C843 101 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 USP43Q70EL4 1123 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 RD3Q7Z3Z2 195 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 THOC6Q86W42 341 aaKnown RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 OR5AR1Q8NGP9 310 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 OR56A3Q8NH54 315 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 ZNF480Q8WV37 535 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 TUBGCP3Q96CW5 907 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 NSL1Q96IY1 281 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 CADM1Q9BY67 442 aaKnown RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 TUBB1Q9H4B7 451 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 ARL8BQ9NVJ2 186 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 ARMC1Q9NVT9 282 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 TRPS1Q9UHF7 1281 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 TMA7Q9Y2S6 64 aaKnown RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 CAPN14A8MX76 684 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 B3GALNT1O75752 331 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 OCM2P0CE71 109 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 OCMP0CE72 109 aaPredicted RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 ESRRAP11474 423 aaPredicted RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 UQCRBP14927 111 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 EPORP19235 508 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 AOC1P19801 751 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 CHN2P52757 468 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 NADK2Q4G0N4 442 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 TPRG1LQ5T0D9 272 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 FAM219BQ5XKK7 198 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 TMEM198Q66K66 360 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 CAPN13Q6MZZ7 669 aaPredicted RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 LARP4Q71RC2 724 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 OR13H1Q8NG92 308 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 OR5K2Q8NHB8 316 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 TSACCQ96A04 125 aaPredicted RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 C3orf30Q96M34 536 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 C12orf66Q96MD2 445 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 DHRS9Q9BPW9 319 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 AIFM2Q9BRQ8 373 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 UQCC2Q9BRT2 126 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 IER2Q9BTL4 223 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 MRPS26Q9BYN8 205 aaKnown RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 PCED1AQ9H1Q7 454 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 TRIT1Q9H3H1 467 aaKnown RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 CCDC177Q9NQR7 707 aaPredicted RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 INTS7Q9NVH2 962 aaKnown RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 RIC8BQ9NVN3 520 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 PADI4Q9UM07 663 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 RNF11Q9Y3C5 154 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 PLEKHM1Q9Y4G2 1056 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 PCDHGB3Q9Y5G1 929 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 PTGDR2Q9Y5Y4 395 aa7.82□□□□□ -1.16
CCDC39-201ENST00000442201 CFAP20Q9Y6A4 193 aaKnown RBP7.82□□□□□ -1.16
CCDC39-201ENST00000442201 PRR19A6NJB7 356 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 SCAMP1O15126 338 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 UBDO15205 165 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 TCEA1P23193 301 aaKnown RBP7.81□□□□□ -1.16
CCDC39-201ENST00000442201 ADSLP30566 484 aaPredicted RBP7.81□□□□□ -1.16
CCDC39-201ENST00000442201 SRP54P61011 504 aaKnown RBP7.81□□□□□ -1.16
CCDC39-201ENST00000442201 APOFQ13790 326 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 PTK2BQ14289 1009 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 KLHDC8AQ8IYD2 350 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 TBC1D21Q8IYX1 336 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 SAMD14Q8IZD0 417 aaPredicted RBP7.81□□□□□ -1.16
CCDC39-201ENST00000442201 MAGEB10Q96LZ2 347 aaPredicted RBP7.81□□□□□ -1.16
CCDC39-201ENST00000442201 SLC29A3Q9BZD2 475 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 AKTIPQ9H8T0 292 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 ST14Q9Y5Y6 855 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 KCNE2Q9Y6J6 123 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 CEPT1Q9Y6K0 416 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 METTL12A8MUP2 240 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 FFAR3O14843 346 aa7.81□□□□□ -1.16
CCDC39-201ENST00000442201 AXIN1O15169 862 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms