RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 STAT5AP42229 794 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 SLC18A2Q05940 514 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 TTMPQ5BVD1 217 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 ICE2Q659A1 982 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 FIGLAQ6QHK4 219 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 AGTRAPQ6RW13 159 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 SRRM1Q8IYB3 904 aaKnown RBP16.96■□□□□ 0.31
CCDC188-201ENST00000439765 LRRC56Q8IYG6 542 aaPredicted RBP16.96■□□□□ 0.31
CCDC188-201ENST00000439765 SLC38A9Q8NBW4 561 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 ALKBH8Q96BT7 664 aaKnown RBP16.96■□□□□ 0.31
CCDC188-201ENST00000439765 PDLIM5Q96HC4 596 aaKnown RBP16.96■□□□□ 0.31
CCDC188-201ENST00000439765 HIST1H2AHQ96KK5 128 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 ATP6V1G3Q96LB4 118 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 CCDC138Q96M89 665 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 FCRL4Q96PJ5 515 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 HIST1H2AJQ99878 128 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 H2AFJQ9BTM1 129 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 DPH7Q9BTV6 452 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 ATG10Q9H0Y0 220 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 VPS11Q9H270 941 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 GPN2Q9H9Y4 310 aaPredicted RBP16.96■□□□□ 0.31
CCDC188-201ENST00000439765 MRPS30Q9NP92 439 aaKnown RBP16.96■□□□□ 0.31
CCDC188-201ENST00000439765 SERTAD3Q9UJW9 196 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 ACOT9Q9Y305 439 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 ACTL7BQ9Y614 415 aa16.96■□□□□ 0.31
CCDC188-201ENST00000439765 A0A087X1B8 175 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 LOC101059948A0A1B0GTJ6 334 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 CTSVO60911 334 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 FKBP9O95302 570 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 GPS2Q13227 327 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 MAP7Q14244 749 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 TSNQ15631 228 aaKnown RBP16.95■□□□□ 0.3
CCDC188-201ENST00000439765 PPP1R3AQ16821 1122 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 FRA10AC1Q70Z53 315 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 GPR135Q8IZ08 494 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 DNAJC22Q8N4W6 341 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 KIAA1143Q96AT1 154 aaPredicted RBP16.95■□□□□ 0.3
CCDC188-201ENST00000439765 CLIP3Q96DZ5 547 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 TRIM54Q9BYV2 358 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 SLC7A5P2Q9GIP4 190 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 SPRTNQ9H040 489 aaPredicted RBP16.95■□□□□ 0.3
CCDC188-201ENST00000439765 ACTR5Q9H9F9 607 aaPredicted RBP16.95■□□□□ 0.3
CCDC188-201ENST00000439765 PCMTD2Q9NV79 361 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 CROTQ9UKG9 612 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 PLCL2Q9UPR0 1127 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 PCDHB3Q9Y5E6 796 aa16.95■□□□□ 0.3
CCDC188-201ENST00000439765 SETXQ7Z333 2677 aaKnown RBP16.95■□□□□ 0.3
CCDC188-201ENST00000439765 NBASA2RRP1 2371 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 IGKV1-8A0A0C4DH67 115 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 ZSCAN9O15535 394 aaPredicted RBP16.94■□□□□ 0.3
CCDC188-201ENST00000439765 ZNF749O43361 778 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 CCNDBP1O95273 360 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 ENO2P09104 434 aaPredicted RBP16.94■□□□□ 0.3
CCDC188-201ENST00000439765 CCDC166P0CW27 439 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 ATXN8OSP0DMR3 200 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 CREB1P16220 341 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 SLC26A3P40879 764 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 AP1S2P56377 157 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 MAGOHP61326 146 aaKnown RBP16.94■□□□□ 0.3
CCDC188-201ENST00000439765 ABHD18Q0P651 414 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 PRAMEF13Q5VWM6 474 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 ADCK2Q7Z695 626 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 C4orf33Q8N1A6 199 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 ZNF655Q8N720 491 aaPredicted RBP16.94■□□□□ 0.3
CCDC188-201ENST00000439765 UBXN10Q96LJ8 280 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 SMC6Q96SB8 1091 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 ARHGAP9Q9BRR9 750 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 MED4Q9NPJ6 270 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 LHX9Q9NQ69 397 aa16.94■□□□□ 0.3
CCDC188-201ENST00000439765 CUEDC1Q9NWM3 386 aaPredicted RBP16.94■□□□□ 0.3
CCDC188-201ENST00000439765 ASH1LQ9NR48 2969 aaKnown RBP16.94■□□□□ 0.3
CCDC188-201ENST00000439765 HMGB1P1B2RPK0 211 aaPredicted RBP16.93■□□□□ 0.3
CCDC188-201ENST00000439765 H3BMH7 237 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 CCNYL3P0C7X3 344 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 SFTPCP11686 197 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 COL6A2P12110 1019 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 DLSTP36957 453 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 CYP4F2P78329 520 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 IRF9Q00978 393 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 NAE1Q13564 534 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 TBR1Q16650 682 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 HSP90B2PQ58FF3 399 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 FAM199XQ6PEV8 388 aaPredicted RBP16.93■□□□□ 0.3
CCDC188-201ENST00000439765 ADAMTSL2Q86TH1 951 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 TBC1D1Q86TI0 1168 aaPredicted RBP16.93■□□□□ 0.3
CCDC188-201ENST00000439765 MCATQ8IVS2 390 aaKnown RBP16.93■□□□□ 0.3
CCDC188-201ENST00000439765 CENPLQ8N0S6 344 aaPredicted RBP16.93■□□□□ 0.3
CCDC188-201ENST00000439765 PLD6Q8N2A8 252 aaKnown RBP16.93■□□□□ 0.3
CCDC188-201ENST00000439765 ZUFSPQ96AP4 578 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 PYCR2Q96C36 320 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 SLC45A3Q96JT2 553 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 SELENOSQ9BQE4 189 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 DERL2Q9GZP9 239 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 AKIRIN1Q9H9L7 192 aaPredicted RBP16.93■□□□□ 0.3
CCDC188-201ENST00000439765 STARD5Q9NSY2 213 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 IL17BQ9UHF5 180 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 PADI1Q9ULC6 663 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 SH2B3Q9UQQ2 575 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 KLK4Q9Y5K2 254 aa16.93■□□□□ 0.3
CCDC188-201ENST00000439765 CCDC88CQ9P219 2028 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms