RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CPA4Q9UI42 421 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 CNTNAP1P78357 1384 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 LAMB1P07942 1786 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 OR51F1A6NGY5 319 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 SLC28A2O43868 658 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 OR10H2O60403 315 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 KLHL18O94889 574 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 NUDT14O95848 222 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 C7P10643 843 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 CDH1P12830 882 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 IFI30P13284 250 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 GSTM2P28161 218 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 GDI1P31150 447 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 RPL4P36578 427 aaKnown RBP6.21□□□□□ -1.41
BDNF-211ENST00000439476 HNRNPFP52597 415 aaKnown RBP6.21□□□□□ -1.41
BDNF-211ENST00000439476 MANFP55145 182 aaKnown RBP6.21□□□□□ -1.41
BDNF-211ENST00000439476 TAS2R41P59536 307 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 DNAJB13P59910 316 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 PITX1P78337 314 aaPredicted RBP6.21□□□□□ -1.41
BDNF-211ENST00000439476 RPL19P84098 196 aaKnown RBP6.21□□□□□ -1.41
BDNF-211ENST00000439476 DBPQ10586 325 aaPredicted RBP6.21□□□□□ -1.41
BDNF-211ENST00000439476 GRM2Q14416 872 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 CPSF6Q16630 551 aaKnown RBP eCLIP6.21□□□□□ -1.41
BDNF-211ENST00000439476 WSCD2Q2TBF2 565 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 PYHIN1Q6K0P9 492 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 FAM131AQ6UXB0 335 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 RTL4Q6ZR62 310 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 LAPTM4BQ86VI4 370 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 LINC00518Q8N0U6 118 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 TMEM130Q8N3G9 435 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 CLHC1Q8NHS4 586 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 CIDECQ96AQ7 238 aaPredicted RBP6.21□□□□□ -1.41
BDNF-211ENST00000439476 PCED1BQ96HM7 432 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 EXOC2Q96KP1 924 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 C12orf42Q96LP6 360 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 TMEM74Q96NL1 305 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 RAB11FIP5Q9BXF6 653 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 MKRN2Q9H000 416 aaKnown RBP6.21□□□□□ -1.41
BDNF-211ENST00000439476 NARFLQ9H6Q4 476 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 TRMT13Q9NUP7 481 aaKnown RBP6.21□□□□□ -1.41
BDNF-211ENST00000439476 SMPD4Q9NXE4 827 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 LUZP4Q9P127 313 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 SEC14L4Q9UDX3 406 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 SEC14L3Q9UDX4 400 aa6.21□□□□□ -1.41
BDNF-211ENST00000439476 GLYATL1P3A0A0U1RQE8 302 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 A0A0X1KG70 313 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 A8MUA0 341 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 TNFRSF11BO00300 401 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 PDCD5O14737 125 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 GNB5O14775 395 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 KHDRBS3O75525 346 aaKnown RBP6.21□□□□□ -1.42
BDNF-211ENST00000439476 ADH1CP00326 375 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 RPLP0P05388 317 aaKnown RBP6.21□□□□□ -1.42
BDNF-211ENST00000439476 HTR2BP41595 481 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 GALNT2Q10471 571 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 PPP1R8Q12972 351 aaKnown RBP6.21□□□□□ -1.42
BDNF-211ENST00000439476 GPR33Q49SQ1 333 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 ZNF311Q5JNZ3 666 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 AADACL4Q5VUY2 407 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 CLEC20AQ6ZU45 233 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 AHSA2Q719I0 299 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 SLC34A3Q8N130 599 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 ANKFN1Q8N957 763 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 KDM1BQ8NB78 822 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 AVL9Q8NBF6 648 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 OR4K2Q8NGD2 314 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 FAR1Q8WVX9 515 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 BIRC7Q96CA5 298 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 ZNF778Q96MU6 729 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 MUS81Q96NY9 551 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 MCMBPQ9BTE3 642 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 TRIM2Q9C040 744 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 PHPT1Q9NRX4 125 aaPredicted RBP6.21□□□□□ -1.42
BDNF-211ENST00000439476 ZNF490Q9ULM2 529 aaPredicted RBP6.21□□□□□ -1.42
BDNF-211ENST00000439476 OR10H1Q9Y4A9 318 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 EP400Q96L91 3159 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 ABCA3Q99758 1704 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 COL22A1Q8NFW1 1626 aaPredicted RBP6.21□□□□□ -1.42
BDNF-211ENST00000439476 A0A1B0GVM2 712 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 A0A1W2PP18 115 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 TCRBV5S1A1TA0A578 114 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 TCAF2A6NFQ2 919 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 E9PAM4 449 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 CACNB4O00305 520 aaPredicted RBP6.21□□□□□ -1.42
BDNF-211ENST00000439476 PDPK1O15530 556 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 TBL1XO60907 577 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 ABCB7O75027 752 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 NIPSNAP2O75323 286 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 GOT2P00505 430 aaKnown RBP6.21□□□□□ -1.42
BDNF-211ENST00000439476 HMGN1P05114 100 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 IL7RP16871 459 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 HNF4AP41235 474 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 TXNL4AP83876 142 aaKnown RBP6.21□□□□□ -1.42
BDNF-211ENST00000439476 HEPACAMQ14CZ8 416 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 IFI44LQ53G44 452 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 DCST1Q5T197 706 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 DDI2Q5TDH0 399 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 CYB5R2Q6BCY4 276 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 RAET1GQ6H3X3 334 aa6.21□□□□□ -1.42
BDNF-211ENST00000439476 GLRX5Q86SX6 157 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms