RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ZDHHC21Q8IVQ6 265 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 ZZZ3Q8IYH5 903 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 ARL10Q8N8L6 244 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 RASGEF1AQ8N9B8 481 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 DCUN1D5Q9BTE7 237 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 ADNPQ9H2P0 1102 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 BRF2Q9HAW0 419 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 FANCEQ9HB96 536 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 LTB4R2Q9NPC1 389 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 AASDHPPTQ9NRN7 309 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 BLOC1S6Q9UL45 172 aa17.99■□□□□ 0.47
CLK1-205ENST00000434813 MTCL1Q9Y4B5 1905 aaKnown RBP17.99■□□□□ 0.47
CLK1-205ENST00000434813 LOC100130705A0A1B0GUX0 176 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 SLC5A10A0PJK1 596 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 SOBPA7XYQ1 873 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 SLC16A6O15403 523 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 RFPL2O75678 378 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 RHOP08100 348 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 ITGAMP11215 1152 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 PTPN2P17706 415 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 GPX2P18283 190 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 GSTM2P28161 218 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 MMP12P39900 470 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 CTSCP53634 463 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 RAD23AP54725 363 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 ACSM2AQ08AH3 577 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 ZNF691Q5VV52 312 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 ACSM2BQ68CK6 577 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 RBM23Q86U06 439 aaKnown RBP17.98■□□□□ 0.47
CLK1-205ENST00000434813 SORCS1Q8WY21 1168 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 GLYATL1Q969I3 302 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 OTUB2Q96DC9 234 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 LRIG1Q96JA1 1093 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 MAGED4Q96JG8 741 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 VNN3Q9NY84 501 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 FAM8A1Q9UBU6 413 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 ORC6Q9Y5N6 252 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 MAGEB17A8MXT2 336 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 NOL3O60936 208 aaKnown RBP17.98■□□□□ 0.47
CLK1-205ENST00000434813 SEMG1P04279 462 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 ENGP17813 658 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 XPAP23025 273 aaPredicted RBP17.98■□□□□ 0.47
CLK1-205ENST00000434813 CD47Q08722 323 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 PPP1R8Q12972 351 aaKnown RBP17.98■□□□□ 0.47
CLK1-205ENST00000434813 TOP3AQ13472 1001 aaPredicted RBP17.98■□□□□ 0.47
CLK1-205ENST00000434813 NAE1Q13564 534 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 SPIDRQ14159 915 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 CTU2Q2VPK5 515 aaKnown RBP17.98■□□□□ 0.47
CLK1-205ENST00000434813 LRRC23Q53EV4 343 aaPredicted RBP17.98■□□□□ 0.47
CLK1-205ENST00000434813 ZCCHC8Q6NZY4 707 aaKnown RBP17.98■□□□□ 0.47
CLK1-205ENST00000434813 RTL10Q7L3V2 364 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 DCP2Q8IU60 420 aaKnown RBP17.98■□□□□ 0.47
CLK1-205ENST00000434813 HCAR2Q8TDS4 363 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 PHF12Q96QT6 1004 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 OR4K3Q96R72 315 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 MTERF1Q99551 399 aaKnown RBP17.98■□□□□ 0.47
CLK1-205ENST00000434813 WNT6Q9Y6F9 365 aa17.98■□□□□ 0.47
CLK1-205ENST00000434813 SCAMP2O15127 329 aaKnown RBP17.97■□□□□ 0.47
CLK1-205ENST00000434813 KCNK5O95279 499 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 ZNF682O95780 498 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 PRKACGP22612 351 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 IMPA1P29218 277 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 BDKRB1P46663 353 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 PREPP48147 710 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 VASPP50552 380 aaPredicted RBP17.97■□□□□ 0.47
CLK1-205ENST00000434813 TMBIM6P55061 237 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 ISL1P61371 349 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 DDX39BQ13838 428 aaKnown RBP17.97■□□□□ 0.47
CLK1-205ENST00000434813 MEP1AQ16819 746 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 OR56A3Q8NH54 315 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 NRBF2Q96F24 287 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 MED8Q96G25 268 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 CCM2Q9BSQ5 444 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 NAA50Q9GZZ1 169 aaKnown RBP17.97■□□□□ 0.47
CLK1-205ENST00000434813 IL1RAPQ9NPH3 570 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 CIDEBQ9UHD4 219 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 RPS6KA6Q9UK32 745 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 U3KQV3 271 aa17.97■□□□□ 0.47
CLK1-205ENST00000434813 MYO1DO94832 1006 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 RYKP34925 604 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 ASMTP46597 345 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 E2F2Q14209 437 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 CCSMST1Q4G0I0 132 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 LAIR2Q6ISS4 152 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 PTOV1Q86YD1 416 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 SPARTQ8N0X7 666 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 CPA6Q8N4T0 437 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 NAT16Q8N8M0 369 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 OR10Q1Q8NGQ4 319 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 B4GALNT2Q8NHY0 566 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 FBLIM1Q8WUP2 373 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 TM9SF3Q9HD45 589 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 ABCG2Q9UNQ0 655 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 A0A1W2PPW3 197 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 C5orf67F2Z3F1 127 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 TMX2-CTNND1H3BSU7 103 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 NPC1O15118 1278 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 SLC16A8O95907 504 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 C1QCP02747 245 aa17.96■□□□□ 0.47
CLK1-205ENST00000434813 HTR1AP08908 422 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms