RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 MVB12BQ9H7P6 319 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 C3orf18Q9UK00 162 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 MAN2B2Q9Y2E5 1009 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 KCTD3Q9Y597 815 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 NPIPA5E9PKD4 350 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 SCGNO76038 276 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 EPHA4P54764 986 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 PPIDQ08752 370 aaKnown RBP11.81□□□□□ -0.52
UBE3B-203ENST00000434735 ZNF783Q6ZMS7 281 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 RNF111Q6ZNA4 994 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 MSANTD3Q96H12 275 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 ZFRQ96KR1 1074 aaKnown RBP11.81□□□□□ -0.52
UBE3B-203ENST00000434735 ZBP1Q9H171 429 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 DNAAF2Q9NVR5 837 aaKnown RBP11.81□□□□□ -0.52
UBE3B-203ENST00000434735 NPIPA1Q9UND3 350 aa11.81□□□□□ -0.52
UBE3B-203ENST00000434735 CPSF4LA6NMK7 179 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 PGRMC2O15173 223 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 TNFAIP8O95379 198 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 F11P03951 625 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 SMARCD3Q6STE5 483 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 TMIGD1Q6UXZ0 262 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 CAND1Q86VP6 1230 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 C10orf107Q8IVU9 208 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 TRAM1L1Q8N609 369 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 ABHD5Q8WTS1 349 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 KBTBD7Q8WVZ9 684 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 DGCR6LQ9BY27 220 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 ZNF334Q9HCZ1 680 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 THSD1Q9NS62 852 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 RHBDL2Q9NX52 303 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 CHD4Q14839 1912 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 EPHA3P29320 983 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 SLC1A2P43004 574 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 EIF1AXP47813 144 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 RRADP55042 308 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 E2F1Q01094 437 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 FCHO2Q0JRZ9 810 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 TMEM225Q6GV28 225 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 RTL10Q7L3V2 364 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 NPAS3Q8IXF0 933 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 CNEP1R1Q8N9A8 125 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 DOK4Q8TEW6 326 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 TSEN15Q8WW01 171 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 FATE1Q969F0 183 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 NMD3Q96D46 503 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 IL17FQ96PD4 163 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 MMADHCQ9H3L0 296 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 ALG2Q9H553 416 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 ARMCX1Q9P291 453 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 NPIPA2E9PIF3 369 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 NPIPA3F8WFD2 350 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 SSNA1O43805 119 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 GBAP04062 536 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 DBIP07108 87 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 NR2F6P10588 404 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 AK4P27144 223 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 CTHP32929 405 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 SLC26A3P40879 764 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 BCAP31P51572 246 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 PTPRCAPQ14761 206 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 PAQR3Q6TCH7 311 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 C15orf39Q6ZRI6 1047 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 LRRTM3Q86VH5 581 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 CLVS1Q8IUQ0 354 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 DPH7Q9BTV6 452 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 MOCS1Q9NZB8 636 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 A0A087WXM4 84 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 CCNB2O95067 398 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 EMP2P54851 167 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 GALK2Q01415 458 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 CHAF1BQ13112 559 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 HNRNPA1L2Q32P51 320 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 CLEC6AQ6EIG7 209 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 AGTRAPQ6RW13 159 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 SLC5A8Q8N695 610 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 GTPBP3Q969Y2 492 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 TRIM39Q9HCM9 518 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 K7EPI3 171 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 RPL26P61254 145 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 MRPL49Q13405 166 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 SPESP1Q6UW49 350 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 TRIM73Q86UV7 250 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 STX12Q86Y82 276 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 FAM47BQ8NA70 645 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 OR6C4Q8NGE1 309 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 CENPMQ9NSP4 180 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 ADAMTS5Q9UNA0 930 aa11.8□□□□□ -0.52
UBE3B-203ENST00000434735 RPL26L1Q9UNX3 145 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 SAMHD1Q9Y3Z3 626 aaKnown RBP11.8□□□□□ -0.52
UBE3B-203ENST00000434735 IRGMA1A4Y4 181 aa11.79□□□□□ -0.52
UBE3B-203ENST00000434735 TRIM64A6NGJ6 449 aa11.79□□□□□ -0.52
UBE3B-203ENST00000434735 DUXAA6NLW8 204 aa11.79□□□□□ -0.52
UBE3B-203ENST00000434735 MATN2O00339 956 aa11.79□□□□□ -0.52
UBE3B-203ENST00000434735 TBX1O43435 398 aa11.79□□□□□ -0.52
UBE3B-203ENST00000434735 TNFRSF21O75509 655 aa11.79□□□□□ -0.52
UBE3B-203ENST00000434735 IDO1P14902 403 aa11.79□□□□□ -0.52
UBE3B-203ENST00000434735 SCTRP47872 440 aa11.79□□□□□ -0.52
UBE3B-203ENST00000434735 WDR93Q6P2C0 686 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms