RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 CCDC191Q8NCU4 936 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 PIGBQ92521 554 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 CCDC34Q96HJ3 373 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 C2orf48Q96LS8 159 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 ZMAT2Q96NC0 199 aaKnown RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 WNT5BQ9H1J7 359 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 TBC1D17Q9HA65 648 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 ZCCHC17Q9NP64 241 aaKnown RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 TNFRSF19Q9NS68 423 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 NKIRAS2Q9NYR9 191 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 GTSE1Q9NYZ3 720 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 NYAP2Q9P242 653 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 GIMAP2Q9UG22 337 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 CHORDC1Q9UHD1 332 aaPredicted RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 POMT2Q9UKY4 750 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 ZNF256Q9Y2P7 627 aaPredicted RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 WBP11Q9Y2W2 641 aaKnown RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 IGLV4-3A0A075B6K6 122 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 A0A1W2PRQ8 180 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 OR2A25A4D2G3 310 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 AGAP14A8MT82 685 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 F5H0A9 414 aaPredicted RBP2.76□□□□□ -1.97
PTPN4-205ENST00000433888 K7EQD1 137 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 FPGTO14772 594 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 PLOD3O60568 738 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 TSPAN1O60635 241 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 ZNF354AO60765 605 aaPredicted RBP2.76□□□□□ -1.97
PTPN4-205ENST00000433888 ERAL1O75616 437 aaKnown RBP2.76□□□□□ -1.97
PTPN4-205ENST00000433888 TOMM70O94826 608 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 SLCO2B1O94956 709 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 PGM3O95394 542 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 HPP00738 406 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 ADRB2P07550 413 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 CSH1P0DML2 217 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 CSH2P0DML3 217 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 PTGER4P35408 488 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 PTPN14Q15678 1187 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 FAM189A2Q15884 450 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 MS4A18Q3C1V0 323 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 SLC30A6Q6NXT4 461 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 SHQ1Q6PI26 577 aaKnown RBP2.76□□□□□ -1.97
PTPN4-205ENST00000433888 TAGAPQ8N103 731 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 PARP8Q8N3A8 854 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 GPATCH11Q8N954 259 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 KCTD6Q8NC69 237 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 SLC37A3Q8NCC5 494 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 OR5T2Q8NGG2 359 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 C4orf45Q96LM5 186 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 ZNF597Q96LX8 424 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 LINC00167Q96N53 147 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 TREX2Q9BQ50 279 aaPredicted RBP2.76□□□□□ -1.97
PTPN4-205ENST00000433888 ALDH8A1Q9H2A2 487 aaPredicted RBP2.76□□□□□ -1.97
PTPN4-205ENST00000433888 ADNPQ9H2P0 1102 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 TLE6Q9H808 572 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 MTHFD2LQ9H903 347 aaPredicted RBP2.76□□□□□ -1.97
PTPN4-205ENST00000433888 PDE7BQ9NP56 450 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 SH3GLB2Q9NR46 395 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 NSMCE4AQ9NXX6 385 aa2.76□□□□□ -1.97
PTPN4-205ENST00000433888 C19orf25Q9UFG5 118 aaPredicted RBP2.76□□□□□ -1.97
PTPN4-205ENST00000433888 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.75□□□□□ -1.97
PTPN4-205ENST00000433888 O00370 1275 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 ADAM20O43506 726 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 NXPH4O95158 308 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 APOA4P06727 396 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 KLK2P20151 261 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 EIF2DP41214 584 aaKnown RBP2.75□□□□□ -1.97
PTPN4-205ENST00000433888 OR3A2P47893 321 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 PPP5CP53041 499 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 ZNF177Q13360 481 aaPredicted RBP2.75□□□□□ -1.97
PTPN4-205ENST00000433888 TRA2AQ13595 282 aaKnown RBP eCLIP2.75□□□□□ -1.97
PTPN4-205ENST00000433888 RASA2Q15283 850 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 TMEM266Q2M3C6 531 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 DUSP28Q4G0W2 176 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 FAM198BQ6UWH4 519 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 CCBE1Q6UXH8 406 aaPredicted RBP2.75□□□□□ -1.97
PTPN4-205ENST00000433888 ZER1Q7Z7L7 766 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 ZBED8Q8IZ13 594 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 TDRD5Q8NAT2 981 aaKnown RBP2.75□□□□□ -1.97
PTPN4-205ENST00000433888 Q8NFD4 153 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 EXD1Q8NHP7 514 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 SECISBP2LQ93073 1101 aaKnown RBP2.75□□□□□ -1.97
PTPN4-205ENST00000433888 NSUN4Q96CB9 384 aaKnown RBP2.75□□□□□ -1.97
PTPN4-205ENST00000433888 ABHD1Q96SE0 405 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 PSMB7Q99436 277 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 CCDC3Q9BQI4 270 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 TXLNGYQ9BZA5 131 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 MTMR12Q9C0I1 747 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 SYNCQ9H7C4 482 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 VSIG4Q9Y279 399 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 TTLL3Q9Y4R7 772 aa2.75□□□□□ -1.97
PTPN4-205ENST00000433888 TRBV5-5A0A0J9YX44 114 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 SRRM4A7MD48 611 aaKnown RBP2.74□□□□□ -1.97
PTPN4-205ENST00000433888 TLX2O43763 284 aaPredicted RBP2.74□□□□□ -1.97
PTPN4-205ENST00000433888 HSPA4LO95757 839 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 KRT6AP02538 564 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 KRT6BP04259 564 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 DANCRP0C864 163 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 HAPLN1P10915 354 aaPredicted RBP2.74□□□□□ -1.97
PTPN4-205ENST00000433888 MYOGP15173 224 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 KRT6CP48668 564 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms