RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ENGP17813 658 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 TACR1P25103 407 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 SOX3P41225 446 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 ZXDBP98169 803 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 UBE3AQ05086 875 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 EFEMP1Q12805 493 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 DUSP7Q16829 419 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 FAAH2Q6GMR7 532 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 ZNF557Q8N988 423 aaPredicted RBP11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 LPCAT1Q8NF37 534 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 FLCNQ8NFG4 579 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 PPTC7Q8NI37 304 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 ENKURQ8TC29 256 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 HRASLS5Q96KN8 279 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 C1QTNF3Q9BXJ4 246 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 NARFLQ9H6Q4 476 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 ELP3Q9H9T3 547 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 ACOXLQ9NUZ1 547 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 RLIMQ9NVW2 624 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 UBA2Q9UBT2 640 aaPredicted RBP11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 AFF4Q9UHB7 1163 aaKnown RBP11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 TTC3P53804 2025 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 CLIC1O00299 241 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 WWP2O00308 870 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 KLK8O60259 260 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 ZNF780AO75290 641 aaPredicted RBP11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 UGT2B17O75795 530 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 B3GAT3O94766 335 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 C9P02748 559 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 OPN1SWP03999 348 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 CD72P21854 359 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 PCSK1P29120 753 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 MAGEA2P43356 314 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 RAB25P57735 213 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 ZNF280AP59817 542 aaPredicted RBP11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 MAD2L1Q13257 205 aaPredicted RBP11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 CCDC85BQ15834 202 aaPredicted RBP11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 AFTPHQ6ULP2 937 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 CFAP52Q8N1V2 620 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 B3GNT7Q8NFL0 401 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 IGSF8Q969P0 613 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 RNF170Q96K19 258 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 PDGFDQ9GZP0 370 aaPredicted RBP11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 SLC22A4Q9H015 551 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 RBPJLQ9UBG7 517 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 RPS6KA6Q9UK32 745 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 C2orf81A6NN90 581 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 GPX5O75715 221 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 SLC25A27O95847 323 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 OR1E2P47887 323 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 CSNK2BP67870 215 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 NKX3-2P78367 333 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 OLR1P78380 273 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 FAPQ12884 760 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 TIGD5Q53EQ6 642 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 PYDC2Q56P42 97 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 CTSL3PQ5NE16 218 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 UBXN11Q5T124 520 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 PXDC1Q5TGL8 231 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 NADSYN1Q6IA69 706 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 MDGA1Q8NFP4 955 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 GTPBP3Q969Y2 492 aaKnown RBP11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 SIGLEC11Q96RL6 698 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 DHRS9Q9BPW9 319 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 CCM2Q9BSQ5 444 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 GABARAPL1Q9H0R8 117 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 C11orf54Q9H0W9 315 aaPredicted RBP11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 KCNH6Q9H252 994 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 TMEM184CQ9NVA4 438 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 OSER1Q9NX31 292 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 TMPRSS11EQ9UL52 423 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 PCDHGC4Q9Y5F7 938 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 TNPO3Q9Y5L0 923 aaKnown RBP11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 TRAV19A0A0A6YYK7 116 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 TNFRSF11BO00300 401 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 MRPS14O60783 128 aaKnown RBP11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 AOC2O75106 756 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 CNMDO75829 334 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 ESR1P03372 595 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 OR4Q2P0C623 313 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 PSKH1P11801 424 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 ACVR1Q04771 509 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 ARHGEF7Q14155 803 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 EFR3AQ14156 821 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 MBOAT1Q6ZNC8 495 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 LRRTM3Q86VH5 581 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 CALHM3Q86XJ0 350 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 SLC5A8Q8N695 610 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 GPR152Q8TDT2 470 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 ASB15Q8WXK1 588 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 MAL2Q969L2 176 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 DIRAS2Q96HU8 199 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 RIPOR3Q96MK2 946 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 EBPLQ9BY08 206 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 MALT1Q9UDY8 824 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 CLCA3PQ9Y6N3 262 aa11.2□□□□□ -0.62
HMGCS1-202ENST00000433297 BRCA1P38398 1863 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 NT5C1B-RDH14C9J2C7 533 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 SLC28A1O00337 649 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms