RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 LINGO1Q96FE5 620 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 SNF8Q96H20 258 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 MACROD1Q9BQ69 325 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 C17orf62Q9BQA9 187 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 MFRPQ9BY79 579 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 ATG10Q9H0Y0 220 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 SMYD2Q9NRG4 433 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 ZGRF1Q86YA3 2104 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 CENPEQ02224 2701 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 ICE1Q9Y2F5 2266 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 EFCAB8A8MWE9 144 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 H7BY64 318 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 CCDC188H7C350 402 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 EIF3FO00303 357 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-204ENST00000430682 LCMT2O60294 686 aaKnown RBP11.92□□□□□ -0.5
SMPD4-204ENST00000430682 SORBS2O94875 1100 aaKnown RBP11.92□□□□□ -0.5
SMPD4-204ENST00000430682 FDXRP22570 491 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 HSD17B2P37059 387 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 C2orf54Q08AI8 447 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 Q0VFX4 171 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 PDIA2Q13087 525 aaKnown RBP11.92□□□□□ -0.5
SMPD4-204ENST00000430682 ZNF460Q14592 562 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 TRADDQ15628 312 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 SYT16Q17RD7 645 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 FAM214AQ32MH5 1076 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 VWA2Q5GFL6 755 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 KIRREL2Q6UWL6 708 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 KIAA0408Q6ZU52 694 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 GALNT7Q86SF2 657 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 PRSS58Q8IYP2 241 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 GALNT16Q8N428 558 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 AMER3Q8N944 861 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 FBXO36Q8NEA4 188 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 STT3BQ8TCJ2 826 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 PRAP1Q96NZ9 151 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 SMAD5Q99717 465 aaKnown RBP11.92□□□□□ -0.5
SMPD4-204ENST00000430682 NAT9Q9BTE0 207 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 ZNF552Q9H707 407 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-204ENST00000430682 WDR54Q9H977 334 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 ZNF304Q9HCX3 659 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 GPR83Q9NYM4 423 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 TAS2R13Q9NYV9 303 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 MOCS1Q9NZB8 636 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 GRHL1Q9NZI5 618 aa11.92□□□□□ -0.5
SMPD4-204ENST00000430682 CRYBG3Q68DQ2 2970 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 IGLV3-12A0A075B6K2 115 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 CTAGE15A4D2H0 777 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 AGPSO00116 658 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 RAD51CO43502 376 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 ALBP02768 609 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 MMP11P24347 488 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 RRADP55042 308 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 ARL4CP56559 192 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 SOX8P57073 446 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 CSNK1G2P78368 415 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 KLC1Q07866 573 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 CBLBQ13191 982 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 NAE1Q13564 534 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 JMJD6Q6NYC1 403 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-204ENST00000430682 AGTRAPQ6RW13 159 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 PRSS41Q7RTY9 318 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 CTAGE6Q86UF2 777 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 CSNK1A1LQ8N752 337 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 GPATCH11Q8N954 259 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 SPATA4Q8NEY3 305 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 PYCR2Q96C36 320 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 CABS1Q96KC9 395 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 CCDC138Q96M89 665 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 OR4K3Q96R72 315 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 MCMBPQ9BTE3 642 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 SGPP1Q9BX95 441 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 DPH5Q9H2P9 285 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 PARVBQ9HBI1 364 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 PPANQ9NQ55 473 aaKnown RBP11.91□□□□□ -0.5
SMPD4-204ENST00000430682 ANKMY1Q9P2S6 941 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 FBXL4Q9UKA2 621 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 VWA7Q9Y334 891 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 CSAG2Q9Y5P2 127 aa11.91□□□□□ -0.5
SMPD4-204ENST00000430682 A0A0A6YYC8 382 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-204ENST00000430682 FEZF1A0PJY2 475 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 CXorf49A8MYA2 514 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-204ENST00000430682 I3L1I5 382 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-204ENST00000430682 C1QAP02745 245 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 C8GP07360 202 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 ZGLP1P0C6A0 271 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 EZRP15311 586 aaKnown RBP11.9□□□□□ -0.5
SMPD4-204ENST00000430682 NPPBP16860 134 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 PAFAH1B1P43034 410 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 UQCRFS1P47985 274 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 TAS2R39P59534 338 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 ABATP80404 500 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 MAT1AQ00266 395 aaKnown RBP11.9□□□□□ -0.5
SMPD4-204ENST00000430682 RELAQ04206 551 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 FRG1Q14331 258 aaKnown RBP11.9□□□□□ -0.5
SMPD4-204ENST00000430682 MYBPC3Q14896 1274 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 MUM1Q2TAK8 710 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 PLEKHN1Q494U1 663 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-204ENST00000430682 THEMIS2Q5TEJ8 643 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 PRAMEF13Q5VWM6 474 aa11.9□□□□□ -0.5
SMPD4-204ENST00000430682 SLC6A19Q695T7 634 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms