RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 CDC14AQ9UNH5 594 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 TMED5Q9Y3A6 229 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 NPIPB15A6NHN6 443 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 GLOD5A6NK44 160 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 OR10H3O60404 316 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 PIM1P11309 404 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 CREB1P16220 341 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 IL12AP29459 219 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 HLA-FP30511 346 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 CASRP41180 1078 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 P2RY2P41231 377 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 KIR3DL1P43629 444 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 HNRNPKP61978 463 aaKnown RBP eCLIP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 HHEXQ03014 270 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 DCUN1D3Q8IWE4 304 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 MCEMP1Q8IX19 187 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 COX18Q8N8Q8 333 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 PHF10Q8WUB8 498 aaKnown RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 CHFRQ96EP1 664 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 BOCQ9BWV1 1114 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 TDRD1Q9BXT4 1180 aaKnown RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 SEC14L3Q9UDX4 400 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 UTS2RQ9UKP6 389 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 YBX2Q9Y2T7 364 aaKnown RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 GPC6Q9Y625 555 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 C15orf38-AP3S2A0A0A6YYH1 394 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 ZNF860A6NHJ4 632 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 F11P03951 625 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 RNF144AP50876 292 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 CDKN2DP55273 166 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 TAS2R50P59544 299 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 PRR5P85299 388 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 SCRN3Q0VDG4 424 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 IRF4Q15306 451 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 ZIK1Q3SY52 487 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 ZFP69Q49AA0 526 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 ZNF57Q68EA5 555 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 Q7L0L9 218 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 LRRC70Q7Z2Q7 622 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 ARPINQ7Z6K5 226 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 FAM98AQ8NCA5 519 aaKnown RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 ZNF248Q8NDW4 579 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 KCNA7Q96RP8 456 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 TRMOQ9BU70 441 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 WDR12Q9GZL7 423 aaKnown RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 RETREG1Q9H6L5 497 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 TRPV5Q9NQA5 729 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 ZNF222Q9UK12 451 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 MAU2Q9Y6X3 613 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 PEX12O00623 359 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 VEGFDO43915 354 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 NPHS1O60500 1241 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 TGDSO95455 350 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 IMPDH1P20839 514 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 PAICSP22234 425 aaKnown RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 PHC1P78364 1004 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 PLEKHS1Q5SXH7 462 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 CPSF7Q8N684 471 aaKnown RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 OR4F6Q8NGB9 312 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 LRRC20Q8TCA0 184 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 ARMC5Q96C12 935 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 CMTM7Q96FZ5 175 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 MRPL48Q96GC5 212 aaKnown RBP6.9□□□□□ -1.3
ATXN3-204ENST00000429774 CD244Q9BZW8 370 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 CRISPLD1Q9H336 500 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 LDAHQ9H6V9 325 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 EHD3Q9NZN3 535 aa6.9□□□□□ -1.3
ATXN3-204ENST00000429774 ZNF638Q14966 1978 aaKnown RBP6.9□□□□□ -1.31
ATXN3-204ENST00000429774 TMEM233B4DJY2 109 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 SUV39H1O43463 412 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 PLIN3O60664 434 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 TRMUO75648 421 aaKnown RBP6.9□□□□□ -1.31
ATXN3-204ENST00000429774 TRAPPC6AO75865 159 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 LYNP07948 512 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 CD68P34810 354 aaPredicted RBP6.9□□□□□ -1.31
ATXN3-204ENST00000429774 MPIP34949 423 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 KLHDC10Q6PID8 442 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 HSD11B1LQ7Z5J1 315 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 PROSER1Q86XN7 944 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 CPXM2Q8N436 756 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 DPP10Q8N608 796 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 FAM13CQ8NE31 585 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 C1orf109Q9NX04 203 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 GALPQ9UBC7 116 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 CDH22Q9UJ99 828 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 BTBD3Q9Y2F9 522 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 CAPN8A6NHC0 703 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 TNFRSF10BO14763 440 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 CLOCKO15516 846 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 CCNKO75909 580 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 YAP1P46937 504 aaKnown RBP6.9□□□□□ -1.31
ATXN3-204ENST00000429774 NRG3P56975 720 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 CSNK2BP67870 215 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 LARS2Q15031 903 aaKnown RBP6.9□□□□□ -1.31
ATXN3-204ENST00000429774 TRIM71Q2Q1W2 868 aaKnown RBP6.9□□□□□ -1.31
ATXN3-204ENST00000429774 LPCAT4Q643R3 524 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 AGTRAPQ6RW13 159 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 CAND1Q86VP6 1230 aaKnown RBP6.9□□□□□ -1.31
ATXN3-204ENST00000429774 ADHFE1Q8IWW8 467 aa6.9□□□□□ -1.31
ATXN3-204ENST00000429774 BANPQ8N9N5 519 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms