RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 RTP3Q9BQQ7 232 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 SERHL2Q9H4I8 314 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 SERHLQ9NQF3 203 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 MARCH4Q9P2E8 410 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 OR52A4PA6NMU1 304 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 GPX6P59796 221 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 TTC23Q5W5X9 447 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 PTCHD4Q6ZW05 846 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 CACTIN-AS1Q8N1I8 211 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 PHOSPHO1Q8TCT1 267 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 GRHL3Q8TE85 626 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 TMCC2O75069 709 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 HOXD9P28356 352 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 ARSDP51689 593 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 SNTA1Q13424 505 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 MBTPS1Q14703 1052 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 TRIM61Q5EBN2 209 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 COL21A1Q96P44 957 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 KNL1Q8NG31 2342 aa16.57■□□□□ 0.24
SMARCA4-203ENST00000429416 VGLL3A8MV65 326 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 TMEM233B4DJY2 109 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 HCN1O60741 890 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 HOXD8P13378 290 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 TBPL1P62380 186 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 EIPR1Q53HC9 387 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 BOCQ9BWV1 1114 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 SLC29A3Q9BZD2 475 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 KCNK12Q9HB15 430 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 SDHAF3Q9NRP4 125 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 ARL8BQ9NVJ2 186 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 ZNF446Q9NWS9 450 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 DLGAP4Q9Y2H0 992 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 USP3Q9Y6I4 520 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 FEZF1A0PJY2 475 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 MAGEA13PA6NCF6 341 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 AK4P27144 223 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 DEFA1P59665 94 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 DEFA3P59666 94 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 SMAD4Q13485 552 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 METTL21CQ5VZV1 264 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 SLC30A6Q6NXT4 461 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 CAND1Q86VP6 1230 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 ZNF689Q96CS4 500 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 ZDHHC18Q9NUE0 388 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 DKKL1Q9UK85 242 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 TCHHQ07283 1943 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 KLHL33A6NCF5 533 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 TNFRSF11BO00300 401 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 POLR1CO15160 346 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 DGCR6LQ9BY27 220 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 CD248Q9HCU0 757 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 NEUROD4Q9HD90 331 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 PRPF19Q9UMS4 504 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 MAU2Q9Y6X3 613 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 MYH8P13535 1937 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 MFN2O95140 757 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 FABP3P05413 133 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 CTHP32929 405 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 IDH3AP50213 366 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 OR4D2P58180 307 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 MRPL28Q13084 256 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 NR0B2Q15466 257 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 SMARCD3Q6STE5 483 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 IGDCC3Q8IVU1 814 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 FCRL3Q96P31 734 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 MGME1Q9BQP7 344 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 ALG2Q9H553 416 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 CWH43Q9H720 699 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 PTGFRNQ9P2B2 879 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 EBLN1P0CF75 366 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 KCNC3Q14003 757 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.56■□□□□ 0.245e-10■■■□□ 16.7
SMARCA4-203ENST00000429416 IQCHQ86VS3 1027 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 ZDHHC14Q8IZN3 488 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 PLEKHG4BQ96PX9 1271 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 DDX28Q9NUL7 540 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 GIN1Q9NXP7 522 aa16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 PDP1Q9P0J1 537 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-203ENST00000429416 MGRN1O60291 552 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 STX11O75558 287 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 SERPINB1P30740 379 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 CTSKP43235 329 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 PIGXQ8TBF5 258 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 MOCS1Q9NZB8 636 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 SPATA7Q9P0W8 599 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 EDIL3O43854 480 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 PSMG1O95456 288 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 CLPTM1O96005 669 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 PRSS56P0CW18 603 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 RAB28P51157 221 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 CDH12P55289 794 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 ACTR3P61158 418 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 SNAPC1Q16533 368 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 PAQR9Q6ZVX9 377 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 GALNT5Q7Z7M9 940 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 UBE2J2Q8N2K1 259 aa16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 RNASE11Q8TAA1 199 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 SH3YL1Q96HL8 342 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-203ENST00000429416 DCBLD2Q96PD2 775 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms